RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ANKIB1Q9P2G1 1089 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 PCDHA12Q9UN75 941 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 TRAF3IP3Q9Y228 551 aa14.51□□□□□ -0.09
VRK3-209ENST00000594948 H0YGN5 161 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 PGRMC1O00264 195 aaKnown RBP14.5□□□□□ -0.09
VRK3-209ENST00000594948 GFPT2O94808 682 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 PLA2G4BP0C869 781 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 IL1R1P14778 569 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 ECHS1P30084 290 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 ERVK-9P63128 1117 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 DDR1Q08345 913 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 KCNH2Q12809 1159 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 ADAM9Q13443 819 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 CEP85LQ5SZL2 805 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 SLFN11Q7Z7L1 901 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 FAM133AQ8N9E0 248 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 CABS1Q96KC9 395 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 CCT8L2Q96SF2 557 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 MXD3Q9BW11 206 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 GEMIN8Q9NWZ8 242 aaKnown RBP14.5□□□□□ -0.09
VRK3-209ENST00000594948 ADAMTS1Q9UHI8 967 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 NFS1Q9Y697 457 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 GCOM1H8Y6P7 765 aaPredicted RBP14.5□□□□□ -0.09
VRK3-209ENST00000594948 PAEPP09466 180 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 MYZAPP0CAP1 466 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 CYP11B2P19099 503 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 HSD17B3P37058 310 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 GUCY1A3Q02108 690 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 KCNV1Q6PIU1 500 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 MOXD1Q6UVY6 613 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 C6orf89Q6UWU4 347 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 MAATS1Q7Z4T9 603 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 SEC14L1Q92503 715 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 MBOAT7Q96N66 472 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.5□□□□□ -0.091e-6■■■□□ 15.1
VRK3-209ENST00000594948 PACSIN1Q9BY11 444 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 HDAC9Q9UKV0 1011 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 STK24Q9Y6E0 443 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 CAPN7Q9Y6W3 813 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 BTAF1O14981 1849 aa14.5□□□□□ -0.09
VRK3-209ENST00000594948 KCNK3O14649 394 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 ZPR1O75312 459 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 FLOT1O75955 427 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 AFPP02771 609 aaKnown RBP14.49□□□□□ -0.09
VRK3-209ENST00000594948 ZNF543Q08ER8 600 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 HERC4Q5GLZ8 1057 aaPredicted RBP14.49□□□□□ -0.09
VRK3-209ENST00000594948 ARMC9Q7Z3E5 817 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 CCDC91Q7Z6B0 441 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 GPBP1Q86WP2 473 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 SYCE1Q8N0S2 351 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 ACTR5Q9H9F9 607 aaPredicted RBP14.49□□□□□ -0.09
VRK3-209ENST00000594948 JMJD4Q9H9V9 463 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 CD209Q9NNX6 404 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 SUCLA2Q9P2R7 463 aaPredicted RBP14.49□□□□□ -0.09
VRK3-209ENST00000594948 NAGPAQ9UK23 515 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
VRK3-209ENST00000594948 STXBP5LQ9Y2K9 1186 aa14.49□□□□□ -0.09
VRK3-209ENST00000594948 FRMPD2Q68DX3 1309 aaPredicted RBP14.49□□□□□ -0.09
VRK3-209ENST00000594948 CYP3A7-CYP3A51PA0A087WV96 503 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 KCNQ2O43526 872 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 MARCH6O60337 910 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 CYP3A7P24462 503 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 SETQ01105 290 aaPredicted RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 PTK2Q05397 1052 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 GABPAQ06546 454 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 GPATCH4Q5T3I0 446 aaKnown RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 ZNF571Q7Z3V5 609 aaPredicted RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 VPS36Q86VN1 386 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 GPIHBP1Q8IV16 184 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 KLHL7Q8IXQ5 586 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 TPCN2Q8NHX9 752 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 TBC1D22AQ8WUA7 517 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 FGFBP2Q9BYJ0 223 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 RABEP2Q9H5N1 569 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 VCPKMTQ9H867 229 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 METTL14Q9HCE5 456 aaKnown RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 SLC12A6Q9UHW9 1150 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 TTC7AQ9ULT0 858 aaPredicted RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 PACSIN2Q9UNF0 486 aaPredicted RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 DIS3Q9Y2L1 958 aaKnown RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 LRRC37AA6NMS7 1700 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 GTPBP10A4D1E9 387 aaKnown RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 E9PMD0 336 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 SLC16A3O15427 465 aaKnown RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 CALUO43852 315 aaPredicted RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 UCHL3P15374 230 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 ATP2B4P23634 1241 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 SLC12A3P55017 1021 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 ACTN3Q08043 901 aaPredicted RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 HLTFQ14527 1009 aaKnown RBP eCLIP14.48□□□□□ -0.09
VRK3-209ENST00000594948 UAP1Q16222 522 aaPredicted RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 PPP2R5EQ16537 467 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 BMT2Q1RMZ1 405 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 FBXW10Q5XX13 1052 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 EPM2AIP1Q7L775 607 aaPredicted RBP14.48□□□□□ -0.09
VRK3-209ENST00000594948 RPAINQ86UA6 219 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 NELFCDQ8IXH7 590 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 SLFN12Q8IYM2 578 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 ADGRF4Q8IZF3 695 aa14.48□□□□□ -0.09
VRK3-209ENST00000594948 CCDC26Q8TAB7 109 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms