RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 EPOPA6NHQ4 379 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 ARHGEF15O94989 841 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 UPP2O95045 317 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 RPLP2P05387 115 aaKnown RBP12.14□□□□□ -0.47
ZNF540-205ENST00000587220 ARP10275 920 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 GNA11P29992 359 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 ACTR2P61160 394 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 ADAM17P78536 824 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 MRPS5P82675 430 aaKnown RBP12.14□□□□□ -0.47
ZNF540-205ENST00000587220 RUFY4Q6ZNE9 571 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 PHKBQ93100 1093 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 ASB2Q96Q27 587 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
ZNF540-205ENST00000587220 YME1L1Q96TA2 773 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 TCEAL9Q9UHQ7 104 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 MTCH2Q9Y6C9 303 aa12.14□□□□□ -0.47
ZNF540-205ENST00000587220 COL4A4P53420 1690 aaPredicted RBP12.13□□□□□ -0.47
ZNF540-205ENST00000587220 SPTBN5Q9NRC6 3674 aaKnown RBP12.13□□□□□ -0.47
ZNF540-205ENST00000587220 RRN3P2A6NIE6 340 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 M0QZ92 97 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 DDX39AO00148 427 aaKnown RBP12.13□□□□□ -0.47
ZNF540-205ENST00000587220 MEIS1O00470 390 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 BACH1O14867 736 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 PRPF3O43395 683 aaKnown RBP12.13□□□□□ -0.47
ZNF540-205ENST00000587220 GHRP10912 638 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 POU3F3P20264 500 aaPredicted RBP12.13□□□□□ -0.47
ZNF540-205ENST00000587220 CLK2P49760 499 aaKnown RBP12.13□□□□□ -0.47
ZNF540-205ENST00000587220 STAT5BP51692 787 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 GRB10Q13322 594 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 AAK1Q2M2I8 961 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 FAM160B1Q5W0V3 765 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 NIPA1Q7RTP0 329 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 PLA2G4DQ86XP0 818 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 BICD2Q8TD16 824 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 GDPD5Q8WTR4 605 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 DNAJB3Q8WWF6 145 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 SLC26A6Q9BXS9 759 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 ZMYND12Q9H0C1 365 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 FAM49AQ9H0Q0 323 aaPredicted RBP12.13□□□□□ -0.47
ZNF540-205ENST00000587220 CYP46A1Q9Y6A2 500 aa12.13□□□□□ -0.47
ZNF540-205ENST00000587220 ESYT2A0FGR8 921 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 LINC01553A4QN01 128 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 RBAK-RBAKDNI3L0D1 243 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 CHRNA1P02708 482 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 INSRRP14616 1297 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 SLC26A2P50443 739 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 CCT2P78371 535 aaKnown RBP12.12□□□□□ -0.47
ZNF540-205ENST00000587220 SETQ01105 290 aaPredicted RBP12.12□□□□□ -0.47
ZNF540-205ENST00000587220 ITGB3BPQ13352 177 aaPredicted RBP12.12□□□□□ -0.47
ZNF540-205ENST00000587220 IER5Q5VY09 327 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 KRT40Q6A162 431 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 SPRED2Q7Z698 418 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 RPAINQ86UA6 219 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 TRIM22Q8IYM9 498 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 FBXL16Q8N461 479 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 ZNF577Q9BSK1 485 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 RNF26Q9BY78 433 aaPredicted RBP12.12□□□□□ -0.47
ZNF540-205ENST00000587220 NID2Q14112 1375 aa12.12□□□□□ -0.47
ZNF540-205ENST00000587220 SIP14410 1827 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 MBLAC1A4D2B0 266 aaPredicted RBP12.11□□□□□ -0.47
ZNF540-205ENST00000587220 FAM86B1E9PN63 330 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 IPO5O00410 1097 aaKnown RBP12.11□□□□□ -0.47
ZNF540-205ENST00000587220 CPLX1O14810 134 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 EPB41L2O43491 1005 aaKnown RBP12.11□□□□□ -0.47
ZNF540-205ENST00000587220 FAM86B2P0C5J1 330 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
ZNF540-205ENST00000587220 ERVK-21P61565 698 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 MRPS6P82932 125 aaKnown RBP12.11□□□□□ -0.47
ZNF540-205ENST00000587220 LPIN1Q14693 890 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 MARCH8Q5T0T0 291 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 MIS18BP1Q6P0N0 1132 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 CKAP2LQ8IYA6 745 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 FBXO22Q8NEZ5 403 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 ADAMTS19Q8TE59 1207 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 TOP1MTQ969P6 601 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 UIMC1Q96RL1 719 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 PCYT2Q99447 389 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 AGXT2Q9BYV1 514 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 OSBPL7Q9BZF2 842 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 SUGCTQ9HAC7 445 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 NCOA5Q9HCD5 579 aaKnown RBP12.11□□□□□ -0.47
ZNF540-205ENST00000587220 CDY2AQ9Y6F7 541 aa12.11□□□□□ -0.47
ZNF540-205ENST00000587220 PRRC2BQ5JSZ5 2229 aaKnown RBP12.11□□□□□ -0.47
ZNF540-205ENST00000587220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.1□□□□□ -0.47
ZNF540-205ENST00000587220 CCNE2O96020 404 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 CYP3A4P08684 503 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 IFNAR1P17181 557 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 NLRP5P59047 1200 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 HTRA4P83105 476 aaPredicted RBP12.1□□□□□ -0.47
ZNF540-205ENST00000587220 TFF2Q03403 129 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 TMEM62Q0P6H9 643 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
ZNF540-205ENST00000587220 PLCB4Q15147 1175 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms