RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 IRF2BP2Q7Z5L9 587 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CERS5Q8N5B7 392 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CRAMP1Q96RY5 1269 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ANO3Q9BYT9 981 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PLCB1Q9NQ66 1216 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP40Q9NVE5 1235 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PACSIN2Q9UNF0 486 aaPredicted RBP15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 TRAF3IP3Q9Y228 551 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 QSER1Q2KHR3 1735 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ESYT3A0FGR9 886 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 POTEFA5A3E0 1075 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 A6NNZ2 444 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 MPHOSPH10O00566 681 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CES2O00748 559 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 FAM153BP0C7A2 387 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 POTEIP0CG38 1075 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 STAT3P40763 770 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CASP5P51878 434 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PTK2Q05397 1052 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SPIRE1Q08AE8 756 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CDC37Q16543 378 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TUBB8Q3ZCM7 444 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 FAM153CQ494X1 144 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 POTEGQ6S5H5 508 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 POTEEQ6S8J3 1075 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 FRMD5Q7Z6J6 570 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KRT12Q99456 494 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 COA1Q9GZY4 146 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 FAM153AQ9UHL3 310 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TMEM59LQ9UK28 342 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 HDAC9Q9UKV0 1011 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PCDHA1Q9Y5I3 950 aa15.58■□□□□ 0.08
CDK5RAP3-237ENST00000585163 GNGT1P63211 74 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ENOX2Q16206 610 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CATSPER3Q86XQ3 398 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 USP38Q8NB14 1042 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CRYGNQ8WXF5 182 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 IFT81Q8WYA0 676 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 EHD4Q9H223 541 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 BZW2Q9Y6E2 419 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 LRRC37AA6NMS7 1700 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ANKRD65E5RJM6 399 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KRT14P02533 472 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 UCHL3P15374 230 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 GIT2Q14161 759 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CFAP58Q5T655 872 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 BCAS4Q8TDM0 211 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ZHX3Q9H4I2 956 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 LRRC4BQ9NT99 713 aa15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ARMCX3Q9UH62 379 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-237ENST00000585163 THSD7AQ9UPZ6 1657 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ZNF233A6NK53 670 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 HLA-DOAP06340 250 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ACTN1P12814 892 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SLC9A1P19634 815 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CCT5P48643 541 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KNOP1Q1ED39 458 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SKIDA1Q1XH10 827 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 EPM2AIP1Q7L775 607 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ZNF571Q7Z3V5 609 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 EFCAB13Q8IY85 973 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ETNPPLQ8TBG4 499 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 WHAMMQ8TF30 809 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CASKIN2Q8WXE0 1202 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CCDC17Q96LX7 622 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 FAM107BQ9H098 131 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 LTBP4Q8N2S1 1624 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KIF13BQ9NQT8 1826 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 EBAG9O00559 213 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 MEIS2O14770 477 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 RIMBP2O15034 1052 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 AFPP02771 609 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 MYBP10242 640 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 HOXD13P35453 343 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TNNC1P63316 161 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 AP3B2Q13367 1082 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CDC42EP5Q6NZY7 148 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 CD302Q8IX05 232 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SYT2Q8N9I0 419 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PPM1EQ8WY54 764 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PIK3R5Q8WYR1 880 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SPAG5Q96R06 1193 aa15.56■□□□□ 0.08
CDK5RAP3-237ENST00000585163 KLRG2A4D1S0 409 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PDXKO00764 312 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 TBX3O15119 743 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PON1P27169 355 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 RPA1P27694 616 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PSMC6P62333 389 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 ARHGAP4P98171 946 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 RPS6KA1Q15418 735 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SP8Q8IXZ3 490 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.55■□□□□ 0.084e-10■□□□□ 9.4
CDK5RAP3-237ENST00000585163 TAF4BQ92750 862 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 MKL1Q969V6 931 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SHTN1A0MZ66 631 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 RAD51CO43502 376 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 SPATA31C1P0DKV0 1188 aa15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 XRCC5P13010 732 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-237ENST00000585163 PRKCIP41743 596 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms