RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ZNF577Q9BSK1 485 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 TUBE1Q9UJT0 475 aa14.06□□□□□ -0.16
SS18-225ENST00000585121 DDX39AO00148 427 aaKnown RBP14.05□□□□□ -0.16
SS18-225ENST00000585121 TLL1O43897 1013 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 IGBP1P78318 339 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 ADAM17P78536 824 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 PRR16Q569H4 304 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 GALNT17Q6IS24 598 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 MIS18BP1Q6P0N0 1132 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 PRDM12Q9H4Q4 367 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 PCDHA4Q9UN74 947 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 TRIP12Q14669 1992 aaPredicted RBP14.05□□□□□ -0.16
SS18-225ENST00000585121 IGLV3-22A0A075B6J6 115 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 ATG7O95352 703 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 INSRRP14616 1297 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 MYOGP15173 224 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 CIITAP33076 1130 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 USP11P51784 963 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 MBTPS1Q14703 1052 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 RPAINQ86UA6 219 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 DBF4BQ8NFT6 615 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 CRYGNQ8WXF5 182 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 PCYT2Q99447 389 aa14.05□□□□□ -0.16
SS18-225ENST00000585121 SCN5AQ14524 2016 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 PFKFB2O60825 505 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 AMHP03971 560 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 CA3P07451 260 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 KRT76Q01546 638 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 SCRN1Q12765 414 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 PLCB4Q15147 1175 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 FAM26DQ5JW98 314 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 ZNF746Q6NUN9 644 aaPredicted RBP14.04□□□□□ -0.16
SS18-225ENST00000585121 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 ABHD15Q6UXT9 468 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 BLIDQ8IZY5 108 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 WASF1Q92558 559 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 APBB2Q92870 758 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 ZNF302Q9NR11 478 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 TANC1Q9C0D5 1861 aa14.04□□□□□ -0.16
SS18-225ENST00000585121 MBLAC1A4D2B0 266 aaPredicted RBP14.03□□□□□ -0.16
SS18-225ENST00000585121 M0QZ92 97 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 ADAMTS3O15072 1205 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 PSAPP07602 524 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 IGFBP4P22692 258 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 AK2P54819 239 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 RUFY4Q6ZNE9 571 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 SMAP1Q8IYB5 467 aaPredicted RBP14.03□□□□□ -0.16
SS18-225ENST00000585121 TBCKQ8TEA7 893 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 RAD9AQ99638 391 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 TPCN1Q9ULQ1 816 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 SAMM50Q9Y512 469 aa14.03□□□□□ -0.16
SS18-225ENST00000585121 IGKV6D-21A0A0A0MT36 114 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 DHX15O43143 795 aaKnown RBP14.02□□□□□ -0.16
SS18-225ENST00000585121 HBP1O60381 514 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 CCNE2O96020 404 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 DEFB103AP81534 67 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 IER5Q5VY09 327 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 SWSAP1Q6NVH7 229 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 CKAP2LQ8IYA6 745 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 MYOCDQ8IZQ8 938 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 DAGLBQ8NCG7 672 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 TET1Q8NFU7 2136 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 DNAJB3Q8WWF6 145 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 UIMC1Q96RL1 719 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 PCDHA10Q9Y5I2 948 aa14.02□□□□□ -0.16
SS18-225ENST00000585121 DOCK5Q9H7D0 1870 aa14.02□□□□□ -0.17
SS18-225ENST00000585121 CDH23Q9H251 3354 aa14.02□□□□□ -0.17
SS18-225ENST00000585121 STK36Q9NRP7 1315 aa14.01□□□□□ -0.17
SS18-225ENST00000585121 GJB5O95377 273 aa14.01□□□□□ -0.17
SS18-225ENST00000585121 NEK4P51957 841 aa14.01□□□□□ -0.17
SS18-225ENST00000585121 NONOQ15233 471 aaKnown RBP eCLIP14.01□□□□□ -0.17
SS18-225ENST00000585121 TCTN1Q2MV58 587 aa14.01□□□□□ -0.17
SS18-225ENST00000585121 MARCH8Q5T0T0 291 aa14.01□□□□□ -0.17
SS18-225ENST00000585121 KRT25Q7Z3Z0 450 aa14.01□□□□□ -0.17
SS18-225ENST00000585121 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.01□□□□□ -0.17
SS18-225ENST00000585121 ATP8B4Q8TF62 1192 aa14.01□□□□□ -0.17
SS18-225ENST00000585121 IL17RAQ96F46 866 aa14.01□□□□□ -0.17
SS18-225ENST00000585121 IFIH1Q9BYX4 1025 aaKnown RBP14.01□□□□□ -0.17
SS18-225ENST00000585121 FAM49AQ9H0Q0 323 aaPredicted RBP14.01□□□□□ -0.17
SS18-225ENST00000585121 MYO9BQ13459 2157 aa14.01□□□□□ -0.17
SS18-225ENST00000585121 CCDC194A0A1B0GVG4 234 aa14□□□□□ -0.17
SS18-225ENST00000585121 WDR64B1ANS9 1081 aa14□□□□□ -0.17
SS18-225ENST00000585121 GTPBP6O43824 516 aaPredicted RBP14□□□□□ -0.17
SS18-225ENST00000585121 GAS7O60861 476 aa14□□□□□ -0.17
SS18-225ENST00000585121 CHRNA1P02708 482 aa14□□□□□ -0.17
SS18-225ENST00000585121 GHRP10912 638 aa14□□□□□ -0.17
SS18-225ENST00000585121 MRPS6P82932 125 aaKnown RBP14□□□□□ -0.17
SS18-225ENST00000585121 ZNF484Q5JVG2 852 aa14□□□□□ -0.17
SS18-225ENST00000585121 FAM117BQ6P1L5 589 aa14□□□□□ -0.17
SS18-225ENST00000585121 CCDC60Q8IWA6 550 aaPredicted RBP14□□□□□ -0.17
SS18-225ENST00000585121 NME8Q8N427 588 aa14□□□□□ -0.17
SS18-225ENST00000585121 AIFM3Q96NN9 605 aa14□□□□□ -0.17
SS18-225ENST00000585121 RIT2Q99578 217 aa14□□□□□ -0.17
SS18-225ENST00000585121 TEKT3Q9BXF9 490 aa14□□□□□ -0.17
SS18-225ENST00000585121 BRMS1Q9HCU9 246 aa14□□□□□ -0.17
SS18-225ENST00000585121 ORC3Q9UBD5 711 aaPredicted RBP14□□□□□ -0.17
SS18-225ENST00000585121 KCNJ14Q9UNX9 436 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms