RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 LARP6Q9BRS8 491 aaKnown RBP20.32■□□□□ 0.84
SRSF1-209ENST00000585096 ZNF577Q9BSK1 485 aa20.32■□□□□ 0.84
SRSF1-209ENST00000585096 TBC1D22BQ9NU19 505 aa20.32■□□□□ 0.84
SRSF1-209ENST00000585096 TRPC6Q9Y210 931 aa20.32■□□□□ 0.84
SRSF1-209ENST00000585096 DDX39AO00148 427 aaKnown RBP20.31■□□□□ 0.84
SRSF1-209ENST00000585096 IPO5O00410 1097 aaKnown RBP20.31■□□□□ 0.84
SRSF1-209ENST00000585096 ADAMTS3O15072 1205 aa20.31■□□□□ 0.84
SRSF1-209ENST00000585096 ATG7O95352 703 aa20.31■□□□□ 0.84
SRSF1-209ENST00000585096 AMHP03971 560 aa20.31■□□□□ 0.84
SRSF1-209ENST00000585096 RPLP2P05387 115 aaKnown RBP20.31■□□□□ 0.84
SRSF1-209ENST00000585096 IGFBP4P22692 258 aa20.31■□□□□ 0.84
SRSF1-209ENST00000585096 DEFB103AP81534 67 aa20.31■□□□□ 0.84
SRSF1-209ENST00000585096 RASGRP4Q8TDF6 673 aa20.31■□□□□ 0.84
SRSF1-209ENST00000585096 TCEAL9Q9UHQ7 104 aa20.31■□□□□ 0.84
SRSF1-209ENST00000585096 MBLAC1A4D2B0 266 aaPredicted RBP20.3■□□□□ 0.84
SRSF1-209ENST00000585096 BACH1O14867 736 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 CDKL5O76039 1030 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 GJB5O95377 273 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 INSRRP14616 1297 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 CIITAP33076 1130 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 IGBP1P78318 339 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 ANKRD1Q15327 319 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 PRR16Q569H4 304 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 MARCH8Q5T0T0 291 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 FAM160B1Q5W0V3 765 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 MIS18BP1Q6P0N0 1132 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 RUFY4Q6ZNE9 571 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 FAM177A1Q8N128 213 aaPredicted RBP20.3■□□□□ 0.84
SRSF1-209ENST00000585096 APBB2Q92870 758 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 RAD9AQ99638 391 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 C22orf23Q9BZE7 217 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 SCN5AQ14524 2016 aa20.3■□□□□ 0.84
SRSF1-209ENST00000585096 CDH23Q9H251 3354 aa20.29■□□□□ 0.84
SRSF1-209ENST00000585096 IGKV6D-21A0A0A0MT36 114 aa20.29■□□□□ 0.84
SRSF1-209ENST00000585096 DHX15O43143 795 aaKnown RBP20.29■□□□□ 0.84
SRSF1-209ENST00000585096 CCNE2O96020 404 aa20.29■□□□□ 0.84
SRSF1-209ENST00000585096 USP11P51784 963 aa20.29■□□□□ 0.84
SRSF1-209ENST00000585096 TAP1Q03518 808 aa20.29■□□□□ 0.84
SRSF1-209ENST00000585096 ADGRE1Q14246 886 aa20.29■□□□□ 0.84
SRSF1-209ENST00000585096 PLCB4Q15147 1175 aa20.29■□□□□ 0.84
SRSF1-209ENST00000585096 ABHD15Q6UXT9 468 aa20.29■□□□□ 0.84
SRSF1-209ENST00000585096 TMCO2Q7Z6W1 182 aaPredicted RBP20.29■□□□□ 0.84
SRSF1-209ENST00000585096 SLKQ9H2G2 1235 aaPredicted RBP20.29■□□□□ 0.84
SRSF1-209ENST00000585096 PCDHA4Q9UN74 947 aa20.29■□□□□ 0.84
SRSF1-209ENST00000585096 POTEB3A0JP26 581 aa20.28■□□□□ 0.84
SRSF1-209ENST00000585096 DLL1O00548 723 aa20.28■□□□□ 0.84
SRSF1-209ENST00000585096 CHRNA1P02708 482 aa20.28■□□□□ 0.84
SRSF1-209ENST00000585096 GALNT17Q6IS24 598 aa20.28■□□□□ 0.84
SRSF1-209ENST00000585096 ZNF746Q6NUN9 644 aaPredicted RBP20.28■□□□□ 0.84
SRSF1-209ENST00000585096 POTEBQ6S5H4 581 aa20.28■□□□□ 0.84
SRSF1-209ENST00000585096 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.28■□□□□ 0.844e-10■■■■■ 56.8
SRSF1-209ENST00000585096 DNAJB3Q8WWF6 145 aa20.28■□□□□ 0.84
SRSF1-209ENST00000585096 ZNF302Q9NR11 478 aa20.28■□□□□ 0.84
SRSF1-209ENST00000585096 KRT76Q01546 638 aa20.27■□□□□ 0.84
SRSF1-209ENST00000585096 IER5Q5VY09 327 aa20.27■□□□□ 0.84
SRSF1-209ENST00000585096 SMAP1Q8IYB5 467 aaPredicted RBP20.27■□□□□ 0.84
SRSF1-209ENST00000585096 MYOCDQ8IZQ8 938 aa20.27■□□□□ 0.84
SRSF1-209ENST00000585096 PPM1EQ8WY54 764 aa20.27■□□□□ 0.84
SRSF1-209ENST00000585096 ARNTL2Q8WYA1 636 aa20.27■□□□□ 0.84
SRSF1-209ENST00000585096 IFIH1Q9BYX4 1025 aaKnown RBP20.27■□□□□ 0.84
SRSF1-209ENST00000585096 CERS4Q9HA82 394 aa20.27■□□□□ 0.84
SRSF1-209ENST00000585096 PCDHA2Q9Y5H9 948 aa20.27■□□□□ 0.84
SRSF1-209ENST00000585096 HBP1O60381 514 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 PFKFB2O60825 505 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 MGAT3Q09327 533 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 SCRN1Q12765 414 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 MKRN4PQ13434 485 aaPredicted RBP20.26■□□□□ 0.83
SRSF1-209ENST00000585096 SWSAP1Q6NVH7 229 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 FAM117BQ6P1L5 589 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 PDXDC2PQ6P474 469 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 BLIDQ8IZY5 108 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 ATP8B4Q8TF62 1192 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 UIMC1Q96RL1 719 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 FAM49AQ9H0Q0 323 aaPredicted RBP20.26■□□□□ 0.83
SRSF1-209ENST00000585096 TPCN1Q9ULQ1 816 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 INSL6Q9Y581 213 aa20.26■□□□□ 0.83
SRSF1-209ENST00000585096 TRIP12Q14669 1992 aaPredicted RBP20.25■□□□□ 0.83
SRSF1-209ENST00000585096 M0QZ92 97 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 GTPBP6O43824 516 aaPredicted RBP20.25■□□□□ 0.83
SRSF1-209ENST00000585096 PSAPP07602 524 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 GHRP10912 638 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 XBP1P17861 261 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 MRPS6P82932 125 aaKnown RBP20.25■□□□□ 0.83
SRSF1-209ENST00000585096 CCDC60Q8IWA6 550 aaPredicted RBP20.25■□□□□ 0.83
SRSF1-209ENST00000585096 USP38Q8NB14 1042 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 DAGLBQ8NCG7 672 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 TBCKQ8TEA7 893 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 LENG9Q96B70 501 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 OSBPL7Q9BZF2 842 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 PCDHA10Q9Y5I2 948 aa20.25■□□□□ 0.83
SRSF1-209ENST00000585096 LCHNA4D1U4 455 aa20.24■□□□□ 0.83
SRSF1-209ENST00000585096 ARHGEF15O94989 841 aa20.24■□□□□ 0.83
SRSF1-209ENST00000585096 AK2P54819 239 aa20.24■□□□□ 0.83
SRSF1-209ENST00000585096 LPIN1Q14693 890 aa20.24■□□□□ 0.83
SRSF1-209ENST00000585096 CCDC85BQ15834 202 aaPredicted RBP20.24■□□□□ 0.83
SRSF1-209ENST00000585096 ZNF484Q5JVG2 852 aa20.24■□□□□ 0.83
SRSF1-209ENST00000585096 MTHFD1LQ6UB35 978 aa20.24■□□□□ 0.83
SRSF1-209ENST00000585096 CKAP2LQ8IYA6 745 aa20.24■□□□□ 0.83
SRSF1-209ENST00000585096 NME8Q8N427 588 aa20.24■□□□□ 0.83
SRSF1-209ENST00000585096 TRAPPC12Q8WVT3 735 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms