RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 MAN1B1Q9UKM7 699 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 ZSWIM8A7E2V4 1837 aa16.35■□□□□ 0.21
SENP3-208ENST00000583277 E9PMD0 336 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 GGPS1O95749 300 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 SNAI1O95863 264 aaPredicted RBP16.34■□□□□ 0.21
SENP3-208ENST00000583277 SP3Q02447 781 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 GAS2L3Q86XJ1 694 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 BANK1Q8NDB2 785 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 GTPBP4Q9BZE4 634 aaKnown RBP16.34■□□□□ 0.21
SENP3-208ENST00000583277 KATNBL1Q9H079 304 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 NAT10Q9H0A0 1025 aaKnown RBP16.34■□□□□ 0.21
SENP3-208ENST00000583277 BLZF1Q9H2G9 400 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 MLXIPQ9HAP2 919 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 FSD2A1L4K1 749 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 BIN1O00499 593 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 ARIH2O95376 493 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 TBC1D8O95759 1140 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 RPN1P04843 607 aaKnown RBP16.34■□□□□ 0.21
SENP3-208ENST00000583277 SSBP05455 408 aaKnown RBP eCLIP16.34■□□□□ 0.21
SENP3-208ENST00000583277 SUPT20HL2P0C7V6 817 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 TXNP10599 105 aaKnown RBP16.34■□□□□ 0.21
SENP3-208ENST00000583277 XRCC5P13010 732 aaKnown RBP16.34■□□□□ 0.21
SENP3-208ENST00000583277 SLC12A3P55017 1021 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 ASIC1P78348 528 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 DHX8Q14562 1220 aaKnown RBP16.34■□□□□ 0.21
SENP3-208ENST00000583277 KCNB1Q14721 858 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 LY6KQ17RY6 165 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 ANO6Q4KMQ2 910 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 CELF3Q5SZQ8 465 aaKnown RBP16.34■□□□□ 0.21
SENP3-208ENST00000583277 TAPT1Q6NXT6 567 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 C4orf19Q8IY42 314 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 SYT2Q8N9I0 419 aaPredicted RBP16.34■□□□□ 0.21
SENP3-208ENST00000583277 TRIM47Q96LD4 638 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 SAGE1Q9NXZ1 904 aa16.34■□□□□ 0.21
SENP3-208ENST00000583277 MYMKA6NI61 221 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 TRPA1O75762 1119 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.2
SENP3-208ENST00000583277 ATG7O95352 703 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 XRCC6P12956 609 aaKnown RBP eCLIP16.33■□□□□ 0.2
SENP3-208ENST00000583277 CTGFP29279 349 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 CASP1P29466 404 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 HTRA3P83110 453 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 SP4Q02446 784 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 MORC3Q14149 939 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 ABHD15Q6UXT9 468 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 GPBP1Q86WP2 473 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 DHX37Q8IY37 1157 aaKnown RBP16.33■□□□□ 0.2
SENP3-208ENST00000583277 BHMT2Q9H2M3 363 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 KCND2Q9NZV8 630 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 DACH1Q9UI36 760 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 ARID2Q68CP9 1835 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 IGSF9BQ9UPX0 1349 aa16.33■□□□□ 0.2
SENP3-208ENST00000583277 PVALEFA0A1B0GWK0 134 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 NOP56O00567 594 aaKnown RBP16.32■□□□□ 0.2
SENP3-208ENST00000583277 BACH1O14867 736 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
SENP3-208ENST00000583277 CYP2B6P20813 491 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 PSMC6P62333 389 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 ACVR2BQ13705 512 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 DPCR1Q3MIW9 517 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 MLKLQ8NB16 471 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 FAM200AQ8TCP9 573 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 DDX12PQ92771 950 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 CCDC43Q96MW1 224 aaKnown RBP16.32■□□□□ 0.2
SENP3-208ENST00000583277 DNAJC25Q9H1X3 360 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 PDGFCQ9NRA1 345 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 EXOC1Q9NV70 894 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 WRAP73Q9P2S5 460 aaPredicted RBP16.32■□□□□ 0.2
SENP3-208ENST00000583277 GABBR1Q9UBS5 961 aa16.32■□□□□ 0.2
SENP3-208ENST00000583277 DBR1Q9UK59 544 aaKnown RBP16.32■□□□□ 0.2
SENP3-208ENST00000583277 ZHX1Q9UKY1 873 aaPredicted RBP16.32■□□□□ 0.2
SENP3-208ENST00000583277 ARHGEF35A5YM69 484 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 GH1P01241 217 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 CYP11B2P19099 503 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 LAMC2Q13753 1193 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 UGCGQ16739 394 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 IQSEC1Q6DN90 963 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 UNC13DQ70J99 1090 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 TRMT44Q8IYL2 757 aaKnown RBP16.31■□□□□ 0.2
SENP3-208ENST00000583277 PIGOQ8TEQ8 1089 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 SEPT1Q8WYJ6 367 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 EMID1Q96A84 441 aaPredicted RBP16.31■□□□□ 0.2
SENP3-208ENST00000583277 ARHGAP39Q9C0H5 1083 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 BCAS3Q9H6U6 928 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 ANKEF1Q9NU02 776 aa16.31■□□□□ 0.2
SENP3-208ENST00000583277 IGKV6D-21A0A0A0MT36 114 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 KLRC4O43908 158 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 SORBS3O60504 671 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 RHOBTB3O94955 611 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 KRT18P05783 430 aaKnown RBP16.3■□□□□ 0.2
SENP3-208ENST00000583277 HOXD10P28358 340 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 YWHABP31946 246 aaKnown RBP16.3■□□□□ 0.2
SENP3-208ENST00000583277 ZNF165P49910 485 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 DUSP28Q4G0W2 176 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 CT47A1Q5JQC4 288 aaPredicted RBP16.3■□□□□ 0.2
SENP3-208ENST00000583277 FAM160B1Q5W0V3 765 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 SWSAP1Q6NVH7 229 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 CCDC60Q8IWA6 550 aaPredicted RBP16.3■□□□□ 0.2
SENP3-208ENST00000583277 SPATA33Q96N06 139 aa16.3■□□□□ 0.2
SENP3-208ENST00000583277 BPIFA3Q9BQP9 254 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms