RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 BCAP29Q9UHQ4 241 aa14.19□□□□□ -0.14
PCDHGB3-201ENST00000576222 ZCCHC11Q5TAX3 1644 aaKnown RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 LMNAP02545 664 aaKnown RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 ZNF18P17022 549 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 MAPK4P31152 587 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 CYB5D1Q6P9G0 228 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 USP17L2Q6R6M4 530 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 CCDC24Q8N4L8 307 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 BRIP1Q9BX63 1249 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 DMGDHQ9UI17 866 aaKnown RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 USP31Q70CQ4 1352 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 A2ML1A8K2U0 1454 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 K7ENM7 598 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 HSP90AA5PQ58FG0 334 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 SUGP1Q8IWZ8 645 aaKnown RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 DDX27Q96GQ7 796 aaKnown RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 XPO6Q96QU8 1125 aaKnown RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 ASAP1Q9ULH1 1129 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 MIF4GDA9UHW6 222 aaKnown RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 SNAP23O00161 211 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 SERPINB6P35237 376 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 ZC3H18Q86VM9 953 aaKnown RBP14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 CEP120Q8N960 986 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 PCDHA1Q9Y5I3 950 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 SYNGAP1Q96PV0 1343 aa14.18□□□□□ -0.14
PCDHGB3-201ENST00000576222 ESRRAP11474 423 aaPredicted RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 BRAFP15056 766 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 PTPRMP28827 1452 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 CDC37Q16543 378 aaPredicted RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 MAP3K14Q99558 947 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 PHF20Q9BVI0 1012 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 TRIM9Q9C026 710 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 RTCBQ9Y3I0 505 aaKnown RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 FAM187AA6NFU0 413 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 USP17L8P0C7I0 530 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 NSFP46459 744 aaKnown RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 RAD23BP54727 409 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 TBX2Q13207 712 aaPredicted RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 ZNF211Q13398 564 aaPredicted RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 AGBL2Q5U5Z8 902 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 SRRM1Q8IYB3 904 aaKnown RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 OGFOD1Q8N543 542 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 ATP2A3Q93084 1043 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 ADGRB2O60241 1585 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 RAD51CO43502 376 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 PRPF6O94906 941 aaKnown RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 RHOBTB3O94955 611 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 TNNI1P19237 187 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 SPARCL1Q14515 664 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 PLCB4Q15147 1175 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 DPP8Q6V1X1 898 aaPredicted RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 TEX2Q8IWB9 1127 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 TAB3Q8N5C8 712 aaPredicted RBP14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 OSBPL1AQ9BXW6 950 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 CCSER1Q9C0I3 900 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 ZBTB1Q9Y2K1 713 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 USP17L3A6NCW0 530 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 USP17L4A6NCW7 530 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 GAP43P17677 238 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 USP17L1Q7RTZ2 530 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 LRRC37BQ96QE4 947 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 BTG4Q9NY30 223 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 GGT7Q9UJ14 662 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 INTUQ9ULD6 942 aa14.17□□□□□ -0.14
PCDHGB3-201ENST00000576222 WDR91A4D1P6 747 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 POTEMA6NI47 508 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 ENO4A6NNW6 628 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 CHN1P15882 459 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 RFX5P48382 616 aaPredicted RBP14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 MFAP3P55082 362 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 SLC18A3Q16572 532 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 DYNLL2Q96FJ2 89 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 NUF2Q9BZD4 464 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 GGA1Q9UJY5 639 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 ANGPTL2Q9UKU9 493 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 PDS5AQ29RF7 1337 aaKnown RBP14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 CCT8L1PA6NM43 557 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 hCG_1984214I3L0E3 225 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 MEIS1O00470 390 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 RWDD2BP57060 319 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 ASPRV1Q53RT3 343 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 ZNF713Q8N859 430 aaPredicted RBP14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 GSDMBQ8TAX9 411 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 PPP4R1Q8TF05 950 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 UBE2TQ9NPD8 197 aaPredicted RBP14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 C1orf112Q9NSG2 853 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 EHD2Q9NZN4 543 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 PNMA2Q9UL42 364 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 UTYO14607 1347 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 ARAP3Q8WWN8 1544 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 RASSF10A6NK89 507 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 RASA4BC9J798 803 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 RASA4O43374 803 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 HMGB2P26583 209 aaKnown RBP14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 TPD52P55327 224 aaPredicted RBP14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 AGXT2Q9BYV1 514 aa14.16□□□□□ -0.14
PCDHGB3-201ENST00000576222 LACRTQ9GZZ8 138 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms