RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 DPF3Q92784 378 aa9.64□□□□□ -0.87
NUP88-211ENST00000575976 KAT2BQ92831 832 aa9.64□□□□□ -0.87
NUP88-211ENST00000575976 PAWRQ96IZ0 340 aaKnown RBP9.64□□□□□ -0.87
NUP88-211ENST00000575976 MTG1Q9BT17 334 aaPredicted RBP9.64□□□□□ -0.87
NUP88-211ENST00000575976 CFAP45Q9UL16 551 aa9.64□□□□□ -0.87
NUP88-211ENST00000575976 PCDHA10Q9Y5I2 948 aa9.64□□□□□ -0.87
NUP88-211ENST00000575976 ATP6V1DQ9Y5K8 247 aa9.64□□□□□ -0.87
NUP88-211ENST00000575976 BRCA2P51587 3418 aa9.64□□□□□ -0.87
NUP88-211ENST00000575976 EMSYQ7Z589 1322 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 A0A1W2PPC1 479 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 A0A1W2PQ45 241 aaPredicted RBP9.63□□□□□ -0.87
NUP88-211ENST00000575976 A0A1W2PQY0 241 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 VWA3AA6NCI4 1184 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 HAS3O00219 553 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 BACH1O14867 736 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 SPTLC2O15270 562 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 CABYRO75952 493 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 YEATS4O95619 227 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 F2P00734 622 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 COL6A1P12109 1028 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 NCLP19338 710 aaKnown RBP9.63□□□□□ -0.87
NUP88-211ENST00000575976 PSEN2P49810 448 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 STAT5BP51692 787 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 PSMC6P62333 389 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 KRT85P78386 507 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 PDIA5Q14554 519 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 UGCGQ16739 394 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 TMEM266Q2M3C6 531 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 PPP1R13LQ8WUF5 828 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 GLG1Q92896 1179 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 VTI1AQ96AJ9 217 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 DYDC2Q96IM9 177 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 GLT1D1Q96MS3 346 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 EIF2AK1Q9BQI3 630 aaKnown RBP9.63□□□□□ -0.87
NUP88-211ENST00000575976 SENP6Q9GZR1 1112 aaPredicted RBP9.63□□□□□ -0.87
NUP88-211ENST00000575976 SMARCAD1Q9H4L7 1026 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 C11orf49Q9H6J7 331 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 AZI2Q9H6S1 392 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 STARD7Q9NQZ5 370 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 ZNF302Q9NR11 478 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 RGL1Q9NZL6 768 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 GABBR1Q9UBS5 961 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 FBXO2Q9UK22 296 aaPredicted RBP9.63□□□□□ -0.87
NUP88-211ENST00000575976 RCOR1Q9UKL0 485 aa9.63□□□□□ -0.87
NUP88-211ENST00000575976 SRPRBQ9Y5M8 271 aaKnown RBP9.63□□□□□ -0.87
NUP88-211ENST00000575976 MAFBQ9Y5Q3 323 aaPredicted RBP9.63□□□□□ -0.87
NUP88-211ENST00000575976 MORC2Q9Y6X9 1032 aaPredicted RBP9.63□□□□□ -0.87
NUP88-211ENST00000575976 GRIN2DO15399 1336 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 PP2D1A8MPX8 630 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 H3BRB1 525 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 PPP6R2O75170 966 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 SLITRK3O94933 977 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 ATP4AP20648 1035 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 MARK3P27448 753 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 CDC25AP30304 524 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 CHMP4BP1P59074 171 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 CYP4A11Q02928 519 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 CTTNQ14247 550 aaKnown RBP9.62□□□□□ -0.87
NUP88-211ENST00000575976 MFSD10Q14728 455 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 FAM160B1Q5W0V3 765 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 PDXDC2PQ6P474 469 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 PLPPR4Q7Z2D5 763 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 TRMT1LQ7Z2T5 733 aaKnown RBP9.62□□□□□ -0.87
NUP88-211ENST00000575976 NECAB2Q7Z6G3 386 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 UBE2Q1Q7Z7E8 422 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 IGSF22Q8N9C0 903 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 BANK1Q8NDB2 785 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 AFAP1L1Q8TED9 768 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 TNPO1Q92973 898 aaKnown RBP9.62□□□□□ -0.87
NUP88-211ENST00000575976 CLIC6Q96NY7 704 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 HTATIP2Q9BUP3 242 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 RAB34Q9BZG1 259 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 CSRNP2Q9H175 543 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 RNPEPQ9H4A4 650 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 TUT1Q9H6E5 874 aaKnown RBP9.62□□□□□ -0.87
NUP88-211ENST00000575976 ERAP1Q9NZ08 941 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 WRAP73Q9P2S5 460 aaPredicted RBP9.62□□□□□ -0.87
NUP88-211ENST00000575976 LRWD1Q9UFC0 647 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 NR2E3Q9Y5X4 410 aa9.62□□□□□ -0.87
NUP88-211ENST00000575976 IGSF9BQ9UPX0 1349 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 ZNF862O60290 1169 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 MED24O75448 989 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 STBD1O95210 358 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 P4HBP07237 508 aaKnown RBP9.61□□□□□ -0.87
NUP88-211ENST00000575976 SPATA31C1P0DKV0 1188 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 QARSP47897 775 aaKnown RBP9.61□□□□□ -0.87
NUP88-211ENST00000575976 ATN1P54259 1190 aaPredicted RBP9.61□□□□□ -0.87
NUP88-211ENST00000575976 PSMC5P62195 406 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 ITGA7Q13683 1181 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 PLCB4Q15147 1175 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 KIAA0753Q2KHM9 967 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 NBPF20Q3BBV1 942 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 SPECC1Q5M775 1068 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 SLC39A5Q6ZMH5 540 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 CATSPER3Q86XQ3 398 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 TPH2Q8IWU9 490 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 KRI1Q8N9T8 703 aaKnown RBP9.61□□□□□ -0.87
NUP88-211ENST00000575976 ERMNQ8TAM6 284 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 NEK9Q8TD19 979 aa9.61□□□□□ -0.87
NUP88-211ENST00000575976 KCNG4Q8TDN1 519 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms