RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 COL6A1P12109 1028 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 PTMSP20962 102 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 CMA1P23946 247 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 ACLYP53396 1101 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 ACTR2P61160 394 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 LAMC2Q13753 1193 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 SPECC1Q5M775 1068 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 RESP18Q5W5W9 173 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 KRT79Q5XKE5 535 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 MIS18BP1Q6P0N0 1132 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 SHC4Q6S5L8 630 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 B3GNT9Q6UX72 402 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 CCDC73Q6ZRK6 1079 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 CABP7Q86V35 215 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 PCSK9Q8NBP7 692 aaKnown RBP7.52□□□□□ -1.21
PRPF8-210ENST00000574217 RDM1Q8NG50 284 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 RASSF8Q8NHQ8 419 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 NEK9Q8TD19 979 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 SNX29Q8TEQ0 813 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 AFG1LQ8WV93 481 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 MRPS27Q92552 414 aaKnown RBP7.52□□□□□ -1.21
PRPF8-210ENST00000574217 SYMPKQ92797 1274 aaKnown RBP7.52□□□□□ -1.21
PRPF8-210ENST00000574217 EMID1Q96A84 441 aaPredicted RBP7.52□□□□□ -1.21
PRPF8-210ENST00000574217 EPSTI1Q96J88 318 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 CDK5RAP3Q96JB5 506 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 SPATA33Q96N06 139 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 TSEN34Q9BSV6 310 aaKnown RBP7.52□□□□□ -1.21
PRPF8-210ENST00000574217 SENP6Q9GZR1 1112 aaPredicted RBP7.52□□□□□ -1.21
PRPF8-210ENST00000574217 DISC1Q9NRI5 854 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 LMBRD1Q9NUN5 540 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 FAM13BQ9NYF5 915 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 TELO2Q9Y4R8 837 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 TCHHQ07283 1943 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 KDM3AQ9Y4C1 1321 aa7.52□□□□□ -1.21
PRPF8-210ENST00000574217 WDR81Q562E7 1941 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 A0A1B0GVL5 298 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 MOXD2PA6NHM9 499 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 A6NJR5 290 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 EML1O00423 815 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 SLC26A4O43511 780 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 ZEB2O60315 1214 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 PSAPP07602 524 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 MMP3P08254 477 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 MYL3P08590 195 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 PFKFB1P16118 471 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 CDC25AP30304 524 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 TCF7P36402 384 aaPredicted RBP7.51□□□□□ -1.21
PRPF8-210ENST00000574217 CCT6AP40227 531 aaKnown RBP7.51□□□□□ -1.21
PRPF8-210ENST00000574217 CPT1AP50416 773 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 ATN1P54259 1190 aaPredicted RBP7.51□□□□□ -1.21
PRPF8-210ENST00000574217 EPHA7Q15375 998 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 HSDL1Q3SXM5 330 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 CXCL17Q6UXB2 119 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 FSIP1Q8NA03 581 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 PPTC7Q8NI37 304 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 SEPT1Q8WYJ6 367 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 CALML4Q96GE6 196 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 GPR20Q99678 358 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 EIF2AK1Q9BQI3 630 aaKnown RBP7.51□□□□□ -1.21
PRPF8-210ENST00000574217 PYM1Q9BRP8 204 aaKnown RBP7.51□□□□□ -1.21
PRPF8-210ENST00000574217 CCSER1Q9C0I3 900 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 CCDC39Q9UFE4 941 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 PCDHA10Q9Y5I2 948 aa7.51□□□□□ -1.21
PRPF8-210ENST00000574217 SCN10AQ9Y5Y9 1956 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 GSTTP1A0A1W2PQM5 241 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 POTEB3A0JP26 581 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 BACH1O14867 736 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 DKC1O60832 514 aaKnown RBP eCLIP7.5□□□□□ -1.21
PRPF8-210ENST00000574217 SLITRK3O94933 977 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 ATG7O95352 703 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 MBD3O95983 291 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 P4HBP07237 508 aaKnown RBP7.5□□□□□ -1.21
PRPF8-210ENST00000574217 SUPT20HL2P0C7V6 817 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 MUTP22033 750 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 RPA1P27694 616 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 SYKP43405 635 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 QARSP47897 775 aaKnown RBP7.5□□□□□ -1.21
PRPF8-210ENST00000574217 NDUFA8P51970 172 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 PSMC6P62333 389 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 PURAQ00577 322 aaKnown RBP7.5□□□□□ -1.21
PRPF8-210ENST00000574217 CYP4A11Q02928 519 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 FAM160A1Q05DH4 1040 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 KARSQ15046 597 aaKnown RBP7.5□□□□□ -1.21
PRPF8-210ENST00000574217 NFKBIBQ15653 356 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 ZRSR1Q15695 479 aaKnown RBP7.5□□□□□ -1.21
PRPF8-210ENST00000574217 LRRC26Q2I0M4 334 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 BRDTQ58F21 947 aaPredicted RBP7.5□□□□□ -1.21
PRPF8-210ENST00000574217 FAM160B1Q5W0V3 765 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 POTEBQ6S5H4 581 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 ABHD15Q6UXT9 468 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 SLC39A5Q6ZMH5 540 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 USP49Q70CQ1 688 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 CATSPER3Q86XQ3 398 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 TPH2Q8IWU9 490 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 PDILTQ8N807 584 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 BANK1Q8NDB2 785 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 PPP1R13LQ8WUF5 828 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 ATP6V0A1Q93050 837 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
PRPF8-210ENST00000574217 DYDC2Q96IM9 177 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms