RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PRPHP41219 470 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 RANBP1P43487 201 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 CCNHP51946 323 aaPredicted RBP11.84□□□□□ -0.51
PALB2-206ENST00000568219 KCNH2Q12809 1159 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 PABPC4Q13310 644 aaKnown RBP eCLIP11.84□□□□□ -0.51
PALB2-206ENST00000568219 SPATA20Q8TB22 786 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 SFI1A8K8P3 1242 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 ADCY8P40145 1251 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 CETN1Q12798 172 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 ALX1Q15699 326 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 SLC18A3Q16572 532 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 METTL13Q8N6R0 699 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 ZBTB1Q9Y2K1 713 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 IL2RBP14784 551 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 ELF3P78545 371 aaPredicted RBP11.83□□□□□ -0.52
PALB2-206ENST00000568219 LONRF1Q17RB8 773 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 HHATQ5VTY9 493 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 PITPNM3Q9BZ71 974 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 MYMKA6NI61 221 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 TXNDC9O14530 226 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 TRAPPC3O43617 180 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 LGR5O75473 907 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 SLC9A1P19634 815 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 CTNNA2P26232 953 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 RPL13P26373 211 aaKnown RBP11.83□□□□□ -0.52
PALB2-206ENST00000568219 CASP7P55210 303 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 EIF3BP55884 814 aaKnown RBP11.83□□□□□ -0.52
PALB2-206ENST00000568219 IFI35P80217 286 aaPredicted RBP11.83□□□□□ -0.52
PALB2-206ENST00000568219 GLYCTKQ8IVS8 523 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 RAB3IPQ96QF0 476 aaPredicted RBP11.83□□□□□ -0.52
PALB2-206ENST00000568219 ERGIC2Q96RQ1 377 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 PIGSQ96S52 555 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 SEMA6BQ9H3T3 888 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 EMILIN3Q9NT22 766 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 CEP72Q9P209 647 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 HDAC9Q9UKV0 1011 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 KIDINS220Q9ULH0 1771 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 RIMS1Q86UR5 1692 aaKnown RBP11.83□□□□□ -0.52
PALB2-206ENST00000568219 OVOS2A0A0G2JMS6 1433 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 FLT3P36888 993 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 KCNJ2P63252 427 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 PTK2Q05397 1052 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 TROAPQ12815 778 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 SLC30A9Q6PML9 568 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 ZNF365Q70YC5 407 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 HS2ST1Q7LGA3 356 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 AGAP11Q8TF27 550 aa11.83□□□□□ -0.52
PALB2-206ENST00000568219 hCG_2014768A0A024R1R8 64 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 CCDC188H7C350 402 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 FAM13AO94988 1023 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 KCNJ1P48048 391 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 TBC1D10BQ4KMP7 808 aaPredicted RBP11.82□□□□□ -0.52
PALB2-206ENST00000568219 ZC3H18Q86VM9 953 aaKnown RBP11.82□□□□□ -0.52
PALB2-206ENST00000568219 ZNF507Q8TCN5 953 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 HOOK2Q96ED9 719 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 NUDCD1Q96RS6 583 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 ATP6V0A4Q9HBG4 840 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 THRAP3Q9Y2W1 955 aaKnown RBP11.82□□□□□ -0.52
PALB2-206ENST00000568219 KIF20BQ96Q89 1820 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 NPHP3-ACAD11A0A0J9YXS1 232 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 E9PMD0 336 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 BRAFP15056 766 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 BYSLQ13895 437 aaKnown RBP11.82□□□□□ -0.52
PALB2-206ENST00000568219 NAB2Q15742 525 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 MEA1Q16626 185 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 EAPPQ56P03 285 aaPredicted RBP11.82□□□□□ -0.52
PALB2-206ENST00000568219 ABCF3Q9NUQ8 709 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 PRLRP16471 622 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 ATP5DP30049 168 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 DDR1Q08345 913 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 PLCB4Q15147 1175 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 IL17AQ16552 155 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 CCHCR1Q8TD31 782 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 DTX3LQ8TDB6 740 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 CUEDC2Q9H467 287 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 GCNT4Q9P109 453 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 USTQ9Y2C2 406 aa11.82□□□□□ -0.52
PALB2-206ENST00000568219 HECW2Q9P2P5 1572 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 MYL1P05976 194 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 CTCFP49711 727 aaPredicted RBP11.81□□□□□ -0.52
PALB2-206ENST00000568219 ADCY7P51828 1080 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 LRRC63Q05C16 580 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 UBE2SQ16763 222 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 UNC13DQ70J99 1090 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 LRRC47Q8N1G4 583 aaKnown RBP11.81□□□□□ -0.52
PALB2-206ENST00000568219 EPS8L3Q8TE67 593 aaKnown RBP11.81□□□□□ -0.52
PALB2-206ENST00000568219 PARD3BQ8TEW8 1205 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 PLVAPQ9BX97 442 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 VPS37BQ9H9H4 285 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 FAM205AQ6ZU69 1335 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 GRID2IPA4D2P6 1211 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 TMED2Q15363 201 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
PALB2-206ENST00000568219 RPUSD2Q8IZ73 545 aaKnown RBP11.81□□□□□ -0.52
PALB2-206ENST00000568219 SPICE1Q8N0Z3 855 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 MYCT1Q8N699 235 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 GLIS3Q8NEA6 775 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms