RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 IGLV3-22A0A075B6J6 115 aa17.86■□□□□ 0.45
CDH3-204ENST00000565453 LPXNO60711 386 aa17.86■□□□□ 0.45
CDH3-204ENST00000565453 IFNAR1P17181 557 aa17.86■□□□□ 0.45
CDH3-204ENST00000565453 TOB2Q14106 344 aaPredicted RBP17.86■□□□□ 0.45
CDH3-204ENST00000565453 RUFY3Q7L099 469 aa17.86■□□□□ 0.45
CDH3-204ENST00000565453 RNF26Q9BY78 433 aaPredicted RBP17.86■□□□□ 0.45
CDH3-204ENST00000565453 THEGQ9P2T0 379 aa17.86■□□□□ 0.45
CDH3-204ENST00000565453 TUBE1Q9UJT0 475 aa17.86■□□□□ 0.45
CDH3-204ENST00000565453 IGKV6D-21A0A0A0MT36 114 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.85■□□□□ 0.45
CDH3-204ENST00000565453 LINC01553A4QN01 128 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 DHX15O43143 795 aaKnown RBP17.85■□□□□ 0.45
CDH3-204ENST00000565453 CCNE2O96020 404 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 AMHP03971 560 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 INSRRP14616 1297 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 ERVK-21P61565 698 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 HTRA4P83105 476 aaPredicted RBP17.85■□□□□ 0.45
CDH3-204ENST00000565453 GRB10Q13322 594 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 PLCB4Q15147 1175 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 TJAP1Q5JTD0 557 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 KRT40Q6A162 431 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 FAM117BQ6P1L5 589 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 PLPPR4Q7Z2D5 763 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 MYOCDQ8IZQ8 938 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 SP7Q8TDD2 431 aaPredicted RBP17.85■□□□□ 0.45
CDH3-204ENST00000565453 ATXN2LQ8WWM7 1075 aaKnown RBP17.85■□□□□ 0.45
CDH3-204ENST00000565453 KAT6AQ92794 2004 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 C6orf50Q9HD87 102 aa17.85■□□□□ 0.45
CDH3-204ENST00000565453 CUL9Q8IWT3 2517 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 RRN3P2A6NIE6 340 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 PPFIA3O75145 1194 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 ZNF76P36508 570 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 CCT2P78371 535 aaKnown RBP17.84■□□□□ 0.45
CDH3-204ENST00000565453 MCTP2Q6DN12 878 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 PLA2G4DQ86XP0 818 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 MICALL1Q8N3F8 863 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 CCDC12Q8WUD4 166 aaPredicted RBP17.84■□□□□ 0.45
CDH3-204ENST00000565453 DNAJB3Q8WWF6 145 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 APBB2Q92870 758 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 TOP1MTQ969P6 601 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 ZBTB10Q96DT7 871 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 TM6SF1Q9BZW5 370 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 AZI2Q9H6S1 392 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 NCOA5Q9HCD5 579 aaKnown RBP17.84■□□□□ 0.45
CDH3-204ENST00000565453 A0A0C4DFX4 3053 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 PRUNE2Q8WUY3 3088 aa17.84■□□□□ 0.45
CDH3-204ENST00000565453 GTPBP6O43824 516 aaPredicted RBP17.83■□□□□ 0.44
CDH3-204ENST00000565453 EDIL3O43854 480 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 NEFLP07196 543 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 GNA11P29992 359 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 STAT5BP51692 787 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 IGBP1P78318 339 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 LPIN1Q14693 890 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 ABHD15Q6UXT9 468 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 REXO1Q8N1G1 1221 aaKnown RBP17.83■□□□□ 0.44
CDH3-204ENST00000565453 SYMPKQ92797 1274 aaKnown RBP17.83■□□□□ 0.44
CDH3-204ENST00000565453 TGS1Q96RS0 853 aaKnown RBP17.83■□□□□ 0.44
CDH3-204ENST00000565453 SLC26A6Q9BXS9 759 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 IFIH1Q9BYX4 1025 aaKnown RBP17.83■□□□□ 0.44
CDH3-204ENST00000565453 INSL6Q9Y581 213 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 COL4A6Q14031 1691 aa17.83■□□□□ 0.44
CDH3-204ENST00000565453 DDX39AO00148 427 aaKnown RBP17.82■□□□□ 0.44
CDH3-204ENST00000565453 GHRP10912 638 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 CIITAP33076 1130 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 AKAP17AQ02040 695 aaKnown RBP17.82■□□□□ 0.44
CDH3-204ENST00000565453 FBXO47Q5MNV8 452 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 RSPH3Q86UC2 560 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 RASGRP4Q8TDF6 673 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 GDPD5Q8WTR4 605 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 TRAPPC12Q8WVT3 735 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 ASB2Q96Q27 587 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 SUGCTQ9HAC7 445 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 VPS54Q9P1Q0 977 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 TRPC6Q9Y210 931 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 CYP46A1Q9Y6A2 500 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 CDY2AQ9Y6F7 541 aa17.82■□□□□ 0.44
CDH3-204ENST00000565453 PRRC2BQ5JSZ5 2229 aaKnown RBP17.82■□□□□ 0.44
CDH3-204ENST00000565453 IPO5O00410 1097 aaKnown RBP17.81■□□□□ 0.44
CDH3-204ENST00000565453 RPLP2P05387 115 aaKnown RBP17.81■□□□□ 0.44
CDH3-204ENST00000565453 SLC26A2P50443 739 aa17.81■□□□□ 0.44
CDH3-204ENST00000565453 MRPS6P82932 125 aaKnown RBP17.81■□□□□ 0.44
CDH3-204ENST00000565453 CCDC60Q8IWA6 550 aaPredicted RBP17.81■□□□□ 0.44
CDH3-204ENST00000565453 CCDC148Q8NFR7 591 aa17.81■□□□□ 0.44
CDH3-204ENST00000565453 ZNF274Q96GC6 653 aaPredicted RBP17.81■□□□□ 0.44
CDH3-204ENST00000565453 UPF3BQ9BZI7 483 aaKnown RBP17.81■□□□□ 0.44
CDH3-204ENST00000565453 SH3GLB2Q9NR46 395 aa17.81■□□□□ 0.44
CDH3-204ENST00000565453 PCDHA2Q9Y5H9 948 aa17.81■□□□□ 0.44
CDH3-204ENST00000565453 POTEB3A0JP26 581 aa17.8■□□□□ 0.44
CDH3-204ENST00000565453 MRPS5P82675 430 aaKnown RBP17.8■□□□□ 0.44
CDH3-204ENST00000565453 SETQ01105 290 aaPredicted RBP17.8■□□□□ 0.44
CDH3-204ENST00000565453 POTEBQ6S5H4 581 aa17.8■□□□□ 0.44
CDH3-204ENST00000565453 BICD2Q8TD16 824 aa17.8■□□□□ 0.44
CDH3-204ENST00000565453 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
CDH3-204ENST00000565453 LENG9Q96B70 501 aa17.8■□□□□ 0.44
CDH3-204ENST00000565453 UIMC1Q96RL1 719 aa17.8■□□□□ 0.44
CDH3-204ENST00000565453 C17orf80Q9BSJ5 609 aa17.8■□□□□ 0.44
CDH3-204ENST00000565453 FAM49AQ9H0Q0 323 aaPredicted RBP17.8■□□□□ 0.44
CDH3-204ENST00000565453 LMCD1Q9NZU5 365 aa17.8■□□□□ 0.44
CDH3-204ENST00000565453 MTUS1Q9ULD2 1270 aa17.8■□□□□ 0.44
CDH3-204ENST00000565453 SPTBN5Q9NRC6 3674 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms