RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 RNF214Q8ND24 703 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 SCFD2Q8WU76 684 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 SOCS4Q8WXH5 440 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 ATP6V0A1Q93050 837 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 FGD4Q96M96 766 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 CCDC43Q96MW1 224 aaKnown RBP11.49□□□□□ -0.57
USP3-219ENST00000561326 BPIFA3Q9BQP9 254 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 LXNQ9BS40 222 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 MLXIPQ9HAP2 919 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 EXOC1Q9NV70 894 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 MYMKA6NI61 221 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 TNPO2O14787 897 aaKnown RBP11.48□□□□□ -0.57
USP3-219ENST00000561326 RHOBTB3O94955 611 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 LYPLA2O95372 231 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 TXNP10599 105 aaKnown RBP11.48□□□□□ -0.57
USP3-219ENST00000561326 IDEP14735 1019 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 CASP1P29466 404 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 SLC12A3P55017 1021 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 FCGRTP55899 365 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 ACTR2P61160 394 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 DPCR1Q3MIW9 517 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 MORN1Q5T089 497 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 CYFIP1Q7L576 1253 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 KCNK18Q7Z418 384 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 GPBP1Q86WP2 473 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 DHX37Q8IY37 1157 aaKnown RBP11.48□□□□□ -0.57
USP3-219ENST00000561326 C4orf19Q8IY42 314 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 DDX12PQ92771 950 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 MAML3Q96JK9 1138 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 TINF2Q9BSI4 451 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 ABHD16BQ9H3Z7 469 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 CBX8Q9HC52 389 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 KCND2Q9NZV8 630 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
USP3-219ENST00000561326 DBR1Q9UK59 544 aaKnown RBP11.48□□□□□ -0.57
USP3-219ENST00000561326 SYNGAP1Q96PV0 1343 aa11.48□□□□□ -0.57
USP3-219ENST00000561326 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 NOP56O00567 594 aaKnown RBP11.47□□□□□ -0.57
USP3-219ENST00000561326 BACH1O14867 736 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 AOC2O75106 756 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 GGPS1O95749 300 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 CCNE2O96020 404 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 HOXC6P09630 235 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
USP3-219ENST00000561326 RGS2P41220 211 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 PSMC6P62333 389 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 SP2Q02086 613 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 IRF5Q13568 498 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 CELF3Q5SZQ8 465 aaKnown RBP11.47□□□□□ -0.57
USP3-219ENST00000561326 FAM160B1Q5W0V3 765 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 SWSAP1Q6NVH7 229 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 METTL7BQ6UX53 244 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 UNC13DQ70J99 1090 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 BANK1Q8NDB2 785 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 PIGOQ8TEQ8 1089 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 LRRC15Q8TF66 581 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 SEPT1Q8WYJ6 367 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 BHMT2Q9H2M3 363 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 ANKEF1Q9NU02 776 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 PANK4Q9NVE7 773 aa11.47□□□□□ -0.57
USP3-219ENST00000561326 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.47□□□□□ -0.57
USP3-219ENST00000561326 RBM47A0AV96 593 aaKnown RBP11.46□□□□□ -0.57
USP3-219ENST00000561326 IKBKBO14920 756 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 KLRC4O43908 158 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 ATG7O95352 703 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 SUPT20HL2P0C7V6 817 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 CYP11B2P19099 503 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 UBA1P22314 1058 aaKnown RBP11.46□□□□□ -0.57
USP3-219ENST00000561326 SP4Q02446 784 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 LAMC2Q13753 1193 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 LY6KQ17RY6 165 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 IQSEC1Q6DN90 963 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 CCDC62Q6P9F0 684 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 ABHD15Q6UXT9 468 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 C11orf57Q6ZUT1 292 aaPredicted RBP11.46□□□□□ -0.57
USP3-219ENST00000561326 FBXO16Q8IX29 292 aaPredicted RBP11.46□□□□□ -0.57
USP3-219ENST00000561326 AZI2Q9H6S1 392 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 NRBP2Q9NSY0 501 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 GABBR1Q9UBS5 961 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 COL4A3BPQ9Y5P4 624 aa11.46□□□□□ -0.57
USP3-219ENST00000561326 CASP8AP2Q9UKL3 1982 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 ARID2Q68CP9 1835 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 A0A087WWV3 80 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 NKRFO15226 690 aaKnown RBP eCLIP11.45□□□□□ -0.586e-7■■□□□ 13.1
USP3-219ENST00000561326 TBCAO75347 108 aaKnown RBP11.45□□□□□ -0.58
USP3-219ENST00000561326 FARP2O94887 1054 aaPredicted RBP11.45□□□□□ -0.58
USP3-219ENST00000561326 KIF20AO95235 890 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 SNAI1O95863 264 aaPredicted RBP11.45□□□□□ -0.58
USP3-219ENST00000561326 GH1P01241 217 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 GAP43P17677 238 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 BMP6P22004 513 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 YWHABP31946 246 aaKnown RBP11.45□□□□□ -0.58
USP3-219ENST00000561326 PSMC4P43686 418 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 SP3Q02447 781 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 ACVR2BQ13705 512 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 IQCB1Q15051 598 aa11.45□□□□□ -0.58
USP3-219ENST00000561326 ARHGEF6Q15052 776 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms