RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 HEATR6Q6AI08 1181 aaKnown RBP7.35□□□□□ -1.23
USP8-210ENST00000560379 NXNQ6DKJ4 435 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 C12orf40Q86WS4 652 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 TMEM192Q8IY95 271 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 SLC52A2Q9HAB3 445 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 GOLGA6AQ9NYA3 693 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 SUCOQ9UBS9 1254 aaKnown RBP7.35□□□□□ -1.23
USP8-210ENST00000560379 APEX2Q9UBZ4 518 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 ZNF180Q9UJW8 692 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 TRHDEQ9UKU6 1024 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 RGPD2P0DJD1 1756 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 SHANK3Q9BYB0 1731 aa7.35□□□□□ -1.23
USP8-210ENST00000560379 RGPD3A6NKT7 1758 aaPredicted RBP7.34□□□□□ -1.23
USP8-210ENST00000560379 RGPD4Q7Z3J3 1758 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 GABRDO14764 452 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 NPHP1O15259 732 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 PRPF3O43395 683 aaKnown RBP7.34□□□□□ -1.23
USP8-210ENST00000560379 DHX16O60231 1041 aaKnown RBP7.34□□□□□ -1.23
USP8-210ENST00000560379 OPA1O60313 960 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 ASLP04424 464 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 C6orf222P0C671 652 aaPredicted RBP7.34□□□□□ -1.23
USP8-210ENST00000560379 POLD1P28340 1107 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 HOXC9P31274 260 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 TMPRSS15P98073 1019 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 CNGB1Q14028 1251 aaPredicted RBP7.34□□□□□ -1.23
USP8-210ENST00000560379 C10orf62Q5T681 223 aaPredicted RBP7.34□□□□□ -1.23
USP8-210ENST00000560379 SEZ6L2Q6UXD5 910 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 ZNF765Q7L2R6 523 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 FGD2Q7Z6J4 655 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 PHACTR4Q8IZ21 702 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 CNTD1Q8N815 330 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 FAM13CQ8NE31 585 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 FLCNQ8NFG4 579 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 IP6K1Q92551 441 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 WDR89Q96FK6 387 aaPredicted RBP7.34□□□□□ -1.23
USP8-210ENST00000560379 CAMKK2Q96RR4 588 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 TTC1Q99614 292 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 SEMA6CQ9H3T2 930 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 IFT122Q9HBG6 1241 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 INTUQ9ULD6 942 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 CSADQ9Y600 493 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 KAT6BQ8WYB5 2073 aa7.34□□□□□ -1.23
USP8-210ENST00000560379 BICDL2A1A5D9 508 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 C9IYK1 514 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 DYNC1LI2O43237 492 aaPredicted RBP7.33□□□□□ -1.24
USP8-210ENST00000560379 CAPNS1P04632 268 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 NFICP08651 508 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 MAOBP27338 520 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 TRAPPC10P48553 1259 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 ETF1P62495 437 aaKnown RBP7.33□□□□□ -1.24
USP8-210ENST00000560379 SIM2Q14190 667 aaPredicted RBP7.33□□□□□ -1.24
USP8-210ENST00000560379 PDE3AQ14432 1141 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 GFOD2Q3B7J2 385 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 ZNF574Q6ZN55 896 aaPredicted RBP7.33□□□□□ -1.24
USP8-210ENST00000560379 IFNL3Q8IZI9 196 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 TCP11L2Q8N4U5 519 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 MAGEB6Q8N7X4 407 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 TEX19Q8NA77 164 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 GSTCDQ8NEC7 633 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 COG1Q8WTW3 980 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 USP7Q93009 1102 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 FGD4Q96M96 766 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 ACSS3Q9H6R3 686 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 FAM105AQ9NUU6 356 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
USP8-210ENST00000560379 PARD3Q8TEW0 1356 aa7.33□□□□□ -1.24
USP8-210ENST00000560379 TNS1Q9HBL0 1735 aaKnown RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 TNKSO95271 1327 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 COL3A1P02461 1466 aaPredicted RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 NEMP1O14524 444 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 TCERG1O14776 1098 aaKnown RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 TBX1O43435 398 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 JMJD7P0C870 316 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 ZSCAN20P17040 1043 aaPredicted RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 AMPHP49418 695 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 YARSP54577 528 aaKnown RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 ACBD5Q5T8D3 534 aaPredicted RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 SYDE2Q5VT97 1194 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 DGKHQ86XP1 1220 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 MCATQ8IVS2 390 aaKnown RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 SLFN12Q8IYM2 578 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 ZNF513Q8N8E2 541 aaPredicted RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 JPH3Q8WXH2 748 aaPredicted RBP7.32□□□□□ -1.24
USP8-210ENST00000560379 ZNF622Q969S3 477 aaKnown RBP eCLIP7.32□□□□□ -1.24
USP8-210ENST00000560379 ASIC4Q96FT7 647 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 RHOBTB2Q9BYZ6 727 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 WNT10AQ9GZT5 417 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 KLHL25Q9H0H3 589 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 IFT22Q9H7X7 185 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 AS3MTQ9HBK9 375 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 C1GALT1Q9NS00 363 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 TJP2Q9UDY2 1190 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 SPEF1Q9Y4P9 236 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 OVOS2A0A0G2JMS6 1433 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 BCL9O00512 1426 aa7.32□□□□□ -1.24
USP8-210ENST00000560379 RGS13O14921 159 aa7.31□□□□□ -1.24
USP8-210ENST00000560379 CLGNO14967 610 aa7.31□□□□□ -1.24
USP8-210ENST00000560379 CBFA2T2O43439 604 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms