RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SMAD3P84022 425 aaKnown RBP17.88■□□□□ 0.45
DDX54-205ENST00000548786 GUCY1B3Q02153 619 aa17.88■□□□□ 0.45
DDX54-205ENST00000548786 NR5A1Q13285 461 aa17.88■□□□□ 0.45
DDX54-205ENST00000548786 LETM2Q2VYF4 491 aa17.88■□□□□ 0.45
DDX54-205ENST00000548786 RASIP1Q5U651 963 aa17.88■□□□□ 0.45
DDX54-205ENST00000548786 CCDC60Q8IWA6 550 aaPredicted RBP17.88■□□□□ 0.45
DDX54-205ENST00000548786 TRAPPC12Q8WVT3 735 aa17.88■□□□□ 0.45
DDX54-205ENST00000548786 MTIF3Q9H2K0 278 aaKnown RBP17.88■□□□□ 0.45
DDX54-205ENST00000548786 SAMM50Q9Y512 469 aa17.88■□□□□ 0.45
DDX54-205ENST00000548786 TET1Q8NFU7 2136 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.87■□□□□ 0.45
DDX54-205ENST00000548786 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.87■□□□□ 0.45
DDX54-205ENST00000548786 NBNO60934 754 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 INSRRP14616 1297 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 KRT2P35908 639 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 RBL2Q08999 1139 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 MBTPS1Q14703 1052 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 GPNMBQ14956 572 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 PLCB4Q15147 1175 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 EARS2Q5JPH6 523 aaKnown RBP17.87■□□□□ 0.45
DDX54-205ENST00000548786 SWSAP1Q6NVH7 229 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 MIS18BP1Q6P0N0 1132 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 TRAF7Q6Q0C0 670 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 ABHD15Q6UXT9 468 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 TBC1D22BQ9NU19 505 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 TUBE1Q9UJT0 475 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 GTF3C3Q9Y5Q9 886 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 SLC4A7Q9Y6M7 1214 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 NRCAMQ92823 1304 aa17.87■□□□□ 0.45
DDX54-205ENST00000548786 RSPH10B2B2RC85 870 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 SLC37A4O43826 429 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 GAS7O60861 476 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 PFKMP08237 780 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 RSPH10BP0C881 870 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 ACTN1P12814 892 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 DNAJB2P25686 324 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 RABGGTBP53611 331 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 TRIM29Q14134 588 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 RABEP1Q15276 862 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 TCTN1Q2MV58 587 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 ZNF697Q5TEC3 545 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 LRCH2Q5VUJ6 765 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 FAM160B1Q5W0V3 765 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 PDXDC2PQ6P474 469 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 CKAP2LQ8IYA6 745 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 FAM177A1Q8N128 213 aaPredicted RBP17.86■□□□□ 0.45
DDX54-205ENST00000548786 OSBPL7Q9BZF2 842 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 FAM49AQ9H0Q0 323 aaPredicted RBP17.86■□□□□ 0.45
DDX54-205ENST00000548786 BRMS1Q9HCU9 246 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 ZNF302Q9NR11 478 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 DDX25Q9UHL0 483 aaKnown RBP17.86■□□□□ 0.45
DDX54-205ENST00000548786 KAT6AQ92794 2004 aa17.86■□□□□ 0.45
DDX54-205ENST00000548786 POTEB3A0JP26 581 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 CCNT1O60563 726 aaKnown RBP17.85■□□□□ 0.45
DDX54-205ENST00000548786 ATG7O95352 703 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 ADAM17P78536 824 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 KRT76Q01546 638 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 Q4G0T1 1027 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 MARCH8Q5T0T0 291 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 KRT40Q6A162 431 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 ZNF746Q6NUN9 644 aaPredicted RBP17.85■□□□□ 0.45
DDX54-205ENST00000548786 POTEBQ6S5H4 581 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 PLPPR4Q7Z2D5 763 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 SLC5A5Q92911 643 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 PBX4Q9BYU1 374 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 UNC45AQ9H3U1 944 aa17.85■□□□□ 0.45
DDX54-205ENST00000548786 PSAPP07602 524 aa17.84■□□□□ 0.45
DDX54-205ENST00000548786 ATP2A2P16615 1042 aaKnown RBP17.84■□□□□ 0.45
DDX54-205ENST00000548786 GPR153Q6NV75 609 aa17.84■□□□□ 0.45
DDX54-205ENST00000548786 TMCO2Q7Z6W1 182 aaPredicted RBP17.84■□□□□ 0.45
DDX54-205ENST00000548786 NEK8Q86SG6 692 aa17.84■□□□□ 0.45
DDX54-205ENST00000548786 DIS3L2Q8IYB7 885 aaKnown RBP17.84■□□□□ 0.45
DDX54-205ENST00000548786 DNAJB3Q8WWF6 145 aa17.84■□□□□ 0.45
DDX54-205ENST00000548786 ZSCAN31Q96LW9 406 aaPredicted RBP17.84■□□□□ 0.45
DDX54-205ENST00000548786 TEKT3Q9BXF9 490 aa17.84■□□□□ 0.45
DDX54-205ENST00000548786 TTYH1Q9H313 450 aaPredicted RBP17.84■□□□□ 0.45
DDX54-205ENST00000548786 GABBR1Q9UBS5 961 aa17.84■□□□□ 0.45
DDX54-205ENST00000548786 PCDHA10Q9Y5I2 948 aa17.84■□□□□ 0.45
DDX54-205ENST00000548786 CHD9Q3L8U1 2897 aa17.84■□□□□ 0.45
DDX54-205ENST00000548786 GBF1Q92538 1859 aa17.84■□□□□ 0.45
DDX54-205ENST00000548786 CYP3A7-CYP3A51PA0A087WV96 503 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 IGKV6D-21A0A0A0MT36 114 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 WDR64B1ANS9 1081 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 BTBD18B2RXH4 712 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 ST18O60284 1047 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 CD2BP2O95400 341 aaKnown RBP17.83■□□□□ 0.44
DDX54-205ENST00000548786 MMP1P03956 469 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 MYOGP15173 224 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 CYP3A7P24462 503 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 TMEM62Q0P6H9 643 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 SMAP1Q8IYB5 467 aaPredicted RBP17.83■□□□□ 0.44
DDX54-205ENST00000548786 TIFAQ96CG3 184 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 TBC1D32Q96NH3 1257 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 SH2B1Q9NRF2 756 aaPredicted RBP17.83■□□□□ 0.44
DDX54-205ENST00000548786 DISC1Q9NRI5 854 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 MTMR10Q9NXD2 777 aa17.83■□□□□ 0.44
DDX54-205ENST00000548786 RRN3P2A6NIE6 340 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 CXCL10P02778 98 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 ATP4AP20648 1035 aa17.82■□□□□ 0.44
DDX54-205ENST00000548786 KCNJ6P48051 423 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms