RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PTK2Q05397 1052 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 TRADDQ15628 312 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 HERC4Q5GLZ8 1057 aaPredicted RBP10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 FBXW10Q5XX13 1052 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 DPY19L2P1Q6NXN4 242 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 KCNV1Q6PIU1 500 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 RUFY4Q6ZNE9 571 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 MAATS1Q7Z4T9 603 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 FRMD5Q7Z6J6 570 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 NELFCDQ8IXH7 590 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 CCDC24Q8N4L8 307 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 LRRC57Q8N9N7 239 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 CCT8L2Q96SF2 557 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 JMJD4Q9H9V9 463 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 CAPN7Q9Y6W3 813 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 GAKO14976 1311 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 IGKV6D-41A0A0C4DH26 115 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 E9PMD0 336 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 H0YGN5 161 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 SSBP05455 408 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 ZBTB48P10074 688 aaPredicted RBP10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 HSD17B3P37058 310 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 RNASE9P60153 205 aaKnown RBP10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 ZNF543Q08ER8 600 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 BIRC3Q13489 604 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 HLTFQ14527 1009 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 UBE2SQ16763 222 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 ZNF571Q7Z3V5 609 aaPredicted RBP10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 GPBP1Q86WP2 473 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 CD209Q9NNX6 404 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 TBC1D7Q9P0N9 293 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 NAGPAQ9UK23 515 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 FBXL5Q9UKA1 691 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 HDAC9Q9UKV0 1011 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 KIAA1024Q9UPX6 916 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 TRAF3IP3Q9Y228 551 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 NFS1Q9Y697 457 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 FOCADQ5VW36 1801 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 A0A0A6YYK5 440 aaPredicted RBP10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 PGRMC1O00264 195 aaKnown RBP10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 FLOT1O75955 427 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 IL1R1P14778 569 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 UCHL3P15374 230 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 NR2F2P24468 414 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 DRP2Q13474 957 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 MTMR3Q13615 1198 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 NFIXQ14938 502 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 PLCB4Q15147 1175 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 SMIM5Q71RC9 77 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 SLFN11Q7Z7L1 901 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 ADGRF4Q8IZF3 695 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 PLCD3Q8N3E9 789 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 RASGEF1CQ8N431 466 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 LMBR1Q8WVP7 490 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 SPAG5Q96R06 1193 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.81□□□□□ -0.681e-6■■■□□ 15
SMARCD1-205ENST00000548573 INTUQ9ULD6 942 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 NENFQ9UMX5 172 aa10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
SMARCD1-205ENST00000548573 SART1O43290 800 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 CEP104O60308 925 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 PPP1R11O60927 126 aaPredicted RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 AFPP02771 609 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 SLC12A3P55017 1021 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 GABPAQ06546 454 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 DDR1Q08345 913 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 UAP1Q16222 522 aaPredicted RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 AGBL2Q5U5Z8 902 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 ALKBH5Q6P6C2 394 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 C6orf89Q6UWU4 347 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 LRRC47Q8N1G4 583 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 TPCN2Q8NHX9 752 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 CABS1Q96KC9 395 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 GLT8D2Q9H1C3 349 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 SLITRK6Q9H5Y7 841 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 KANSL2Q9H9L4 492 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 KCNMB3Q9NPA1 279 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 GPCPD1Q9NPB8 672 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 ARMCX3Q9UH62 379 aaPredicted RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 MYH7BA7E2Y1 1941 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 CYP3A7-CYP3A51PA0A087WV96 503 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 POTEB3A0JP26 581 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 POTECB2RU33 542 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 H0YHG0 523 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 ZBTB5O15062 677 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 TTLL1O95922 423 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 SLC9A1P19634 815 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 CYP3A7P24462 503 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 PON1P27169 355 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 CTNNA1P35221 906 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 SEC24CP53992 1094 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 NPEPPSP55786 919 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 KCNQ4P56696 695 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 HDLBPQ00341 1268 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 ZNF844Q08AG5 666 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 ENOX2Q16206 610 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 EXOC3L4Q17RC7 722 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 GPATCH4Q5T3I0 446 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 POTEBQ6S5H4 581 aa10.8□□□□□ -0.68
SMARCD1-205ENST00000548573 SYCE1Q8N0S2 351 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms