RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 BANK1Q8NDB2 785 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 DNAJC19Q96DA6 116 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 FAM212AQ96EL1 285 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 CELF4Q9BZC1 486 aaKnown RBP25.92■■□□□ 1.74
SHD-201ENST00000543264 RAB34Q9BZG1 259 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 LRRC27Q9C0I9 530 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 KIAA1551Q9HCM1 1747 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 MYH7BA7E2Y1 1941 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 IFFO1Q0D2I5 559 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 LACTB2Q53H82 288 aaPredicted RBP25.92■■□□□ 1.74
SHD-201ENST00000543264 TMC3Q7Z5M5 1100 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 CALR3Q96L12 384 aaKnown RBP25.92■■□□□ 1.74
SHD-201ENST00000543264 GANQ9H2C0 597 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 CCDC88AQ3V6T2 1871 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 PAEPP09466 180 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 LRRC57Q8N9N7 239 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 CCT6BQ92526 530 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 TRIM31Q9BZY9 425 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 UBA5Q9GZZ9 404 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 DRD4P21917 467 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 IFI16Q16666 785 aaKnown RBP25.91■■□□□ 1.74
SHD-201ENST00000543264 ARMC9Q7Z3E5 817 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 SH3RF3Q8TEJ3 882 aaPredicted RBP25.91■■□□□ 1.74
SHD-201ENST00000543264 CEP63Q96MT8 703 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 PSMD1Q99460 953 aa25.91■■□□□ 1.74
SHD-201ENST00000543264 KDM4FA0A1W2PPD8 638 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 XRCC4Q13426 336 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 PEX26Q7Z412 305 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 IRF2BP2Q7Z5L9 587 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 GJA10Q969M2 543 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 MIEF2Q96C03 454 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 SPAG5Q96R06 1193 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 BTNL10A8MVZ5 291 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 BHMG1C9JSJ3 638 aaPredicted RBP25.9■■□□□ 1.74
SHD-201ENST00000543264 CACNB1Q02641 598 aaPredicted RBP25.9■■□□□ 1.74
SHD-201ENST00000543264 KCNH2Q12809 1159 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 CHADLQ6NUI6 762 aa25.9■■□□□ 1.74
SHD-201ENST00000543264 SAP30BPQ9UHR5 308 aaKnown RBP25.9■■□□□ 1.74
SHD-201ENST00000543264 GNA14O95837 355 aa25.89■■□□□ 1.74
SHD-201ENST00000543264 PDIA5Q14554 519 aa25.89■■□□□ 1.74
SHD-201ENST00000543264 ALKBH5Q6P6C2 394 aaKnown RBP25.89■■□□□ 1.74
SHD-201ENST00000543264 CCDC26Q8TAB7 109 aa25.89■■□□□ 1.74
SHD-201ENST00000543264 ATP8A1Q9Y2Q0 1164 aa25.89■■□□□ 1.74
SHD-201ENST00000543264 F8VZ95 297 aa25.89■■□□□ 1.73
SHD-201ENST00000543264 F8W031 263 aaPredicted RBP25.89■■□□□ 1.73
SHD-201ENST00000543264 CCDC188H7C350 402 aa25.89■■□□□ 1.73
SHD-201ENST00000543264 SLC9A1P19634 815 aa25.89■■□□□ 1.73
SHD-201ENST00000543264 ADAM9Q13443 819 aa25.89■■□□□ 1.73
SHD-201ENST00000543264 C10orf76Q5T2E6 689 aa25.89■■□□□ 1.73
SHD-201ENST00000543264 EP400NLQ6ZTU2 488 aa25.89■■□□□ 1.73
SHD-201ENST00000543264 TPCN2Q8NHX9 752 aa25.89■■□□□ 1.73
SHD-201ENST00000543264 NAGPAQ9UK23 515 aa25.89■■□□□ 1.73
SHD-201ENST00000543264 TMEM119Q4V9L6 283 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 FOXR2Q6PJQ5 311 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 TGFBRAP1Q8WUH2 860 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 CHMP6Q96FZ7 201 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 KDM4CQ9H3R0 1056 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 CTNND1O60716 968 aaKnown RBP25.88■■□□□ 1.73
SHD-201ENST00000543264 ECM2O94769 699 aaPredicted RBP25.88■■□□□ 1.73
SHD-201ENST00000543264 RASA1P20936 1047 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 ORC2Q13416 577 aaPredicted RBP25.88■■□□□ 1.73
SHD-201ENST00000543264 MSL1Q68DK7 614 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 MAGEC3Q8TD91 643 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 COA7Q96BR5 231 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 XPO6Q96QU8 1125 aaKnown RBP25.88■■□□□ 1.73
SHD-201ENST00000543264 UIMC1Q96RL1 719 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 BMP2KQ9NSY1 1161 aaPredicted RBP25.88■■□□□ 1.73
SHD-201ENST00000543264 BTG4Q9NY30 223 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 SWAP70Q9UH65 585 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 PNMA2Q9UL42 364 aa25.88■■□□□ 1.73
SHD-201ENST00000543264 UTP11Q9Y3A2 253 aaKnown RBP25.88■■□□□ 1.73
SHD-201ENST00000543264 EDIL3O43854 480 aa25.87■■□□□ 1.73
SHD-201ENST00000543264 NPHP3-ACAD11A0A0J9YXS1 232 aa25.87■■□□□ 1.73
SHD-201ENST00000543264 CAND2O75155 1236 aa25.87■■□□□ 1.73
SHD-201ENST00000543264 PPP1R7Q15435 360 aa25.87■■□□□ 1.73
SHD-201ENST00000543264 HIBCHQ6NVY1 386 aaPredicted RBP25.87■■□□□ 1.73
SHD-201ENST00000543264 TRIM37O94972 964 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 RPSAP08865 295 aaKnown RBP25.86■■□□□ 1.73
SHD-201ENST00000543264 ZBTB48P10074 688 aaPredicted RBP25.86■■□□□ 1.73
SHD-201ENST00000543264 SLC8A1P32418 973 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 HERC4Q5GLZ8 1057 aaPredicted RBP25.86■■□□□ 1.73
SHD-201ENST00000543264 TBC1D31Q96DN5 1066 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 TRIM51Q9BSJ1 452 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 BAIAP2L1Q9UHR4 511 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 MGRN1O60291 552 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 MARCH6O60337 910 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 GCFC2P16383 781 aaKnown RBP25.86■■□□□ 1.73
SHD-201ENST00000543264 ELF3P78545 371 aaPredicted RBP25.86■■□□□ 1.73
SHD-201ENST00000543264 SF3B3Q15393 1217 aaKnown RBP25.86■■□□□ 1.73
SHD-201ENST00000543264 ERMARDQ5T6L9 678 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 DAAM2Q86T65 1068 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 CCDC197Q8NCU1 140 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 P3H4Q92791 437 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 SLITRK6Q9H5Y7 841 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 SCN7AQ01118 1682 aa25.86■■□□□ 1.73
SHD-201ENST00000543264 PHLPP1O60346 1717 aa25.85■■□□□ 1.73
SHD-201ENST00000543264 FRMD3A2A2Y4 597 aa25.85■■□□□ 1.73
SHD-201ENST00000543264 CCT8L1PA6NM43 557 aa25.85■■□□□ 1.73
SHD-201ENST00000543264 DNAJC8O75937 253 aaPredicted RBP25.85■■□□□ 1.73
SHD-201ENST00000543264 TXNRD3Q86VQ6 643 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms