RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 XRRA1Q6P2D8 792 aa24.89■■□□□ 1.58
HOMER3-204ENST00000539827 SCFD1Q8WVM8 642 aa24.89■■□□□ 1.58
HOMER3-204ENST00000539827 OPTNQ96CV9 577 aa24.89■■□□□ 1.58
HOMER3-204ENST00000539827 SCN4AP35499 1836 aa24.89■■□□□ 1.58
HOMER3-204ENST00000539827 LGALS16A8MUM7 142 aa24.89■■□□□ 1.57
HOMER3-204ENST00000539827 AKR1B15C9JRZ8 316 aaPredicted RBP24.89■■□□□ 1.57
HOMER3-204ENST00000539827 POTEJP0CG39 1038 aa24.89■■□□□ 1.57
HOMER3-204ENST00000539827 PPIL2Q13356 520 aa24.89■■□□□ 1.57
HOMER3-204ENST00000539827 C1orf186Q6ZWK4 172 aa24.89■■□□□ 1.57
HOMER3-204ENST00000539827 MB21D1Q8N884 522 aa24.89■■□□□ 1.57
HOMER3-204ENST00000539827 CCDC112Q8NEF3 446 aa24.89■■□□□ 1.57
HOMER3-204ENST00000539827 CHST13Q8NET6 341 aa24.89■■□□□ 1.57
HOMER3-204ENST00000539827 NEK9Q8TD19 979 aa24.89■■□□□ 1.57
HOMER3-204ENST00000539827 TRMT1Q9NXH9 659 aaKnown RBP24.89■■□□□ 1.57
HOMER3-204ENST00000539827 ITIH6Q6UXX5 1313 aa24.89■■□□□ 1.57
HOMER3-204ENST00000539827 SFI1A8K8P3 1242 aa24.88■■□□□ 1.57
HOMER3-204ENST00000539827 NKRFO15226 690 aaKnown RBP eCLIP24.88■■□□□ 1.57
HOMER3-204ENST00000539827 TBCAO75347 108 aaKnown RBP24.88■■□□□ 1.57
HOMER3-204ENST00000539827 CASP5P51878 434 aa24.88■■□□□ 1.57
HOMER3-204ENST00000539827 PAGR1Q9BTK6 254 aa24.88■■□□□ 1.57
HOMER3-204ENST00000539827 KCNH4Q9UQ05 1017 aa24.88■■□□□ 1.57
HOMER3-204ENST00000539827 B4DLN1 442 aa24.87■■□□□ 1.57
HOMER3-204ENST00000539827 P4HBP07237 508 aaKnown RBP24.87■■□□□ 1.57
HOMER3-204ENST00000539827 NLRX1Q86UT6 975 aa24.87■■□□□ 1.57
HOMER3-204ENST00000539827 TMEM139Q8IV31 216 aa24.87■■□□□ 1.57
HOMER3-204ENST00000539827 ZNF507Q8TCN5 953 aa24.87■■□□□ 1.57
HOMER3-204ENST00000539827 ASCC2Q9H1I8 757 aaPredicted RBP24.87■■□□□ 1.57
HOMER3-204ENST00000539827 ZCWPW2Q504Y3 356 aa24.87■■□□□ 1.57
HOMER3-204ENST00000539827 LRRC55Q6ZSA7 311 aa24.87■■□□□ 1.57
HOMER3-204ENST00000539827 PNMA8AQ86V59 439 aaPredicted RBP24.87■■□□□ 1.57
HOMER3-204ENST00000539827 R3HCC1Q9Y3T6 440 aaKnown RBP24.87■■□□□ 1.57
HOMER3-204ENST00000539827 FAM13AO94988 1023 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 FGFR1OPO95684 399 aaKnown RBP24.86■■□□□ 1.57
HOMER3-204ENST00000539827 TPM2P07951 284 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 MYBP10242 640 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 CASP14P31944 242 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 RIOX2Q8IUF8 465 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 CCAR2Q8N163 923 aaKnown RBP24.86■■□□□ 1.57
HOMER3-204ENST00000539827 ANKRD35Q8N283 1001 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 GPRASP2Q96D09 838 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 BAG1Q99933 345 aaPredicted RBP24.86■■□□□ 1.57
HOMER3-204ENST00000539827 NOC4LQ9BVI4 516 aaKnown RBP24.86■■□□□ 1.57
HOMER3-204ENST00000539827 ZNF408Q9H9D4 720 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.86■■□□□ 1.57
HOMER3-204ENST00000539827 COL4A3BPQ9Y5P4 624 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 A0A0G2JMZ2 1700 aa24.86■■□□□ 1.57
HOMER3-204ENST00000539827 ARHGEF35A5YM69 484 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 TRAF5O00463 557 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 GYPCP04921 128 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 CNTN2Q02246 1040 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 MAP1SQ66K74 1059 aaPredicted RBP24.85■■□□□ 1.57
HOMER3-204ENST00000539827 E4F1Q66K89 784 aaPredicted RBP24.85■■□□□ 1.57
HOMER3-204ENST00000539827 KCTD10Q9H3F6 313 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 ZSWIM4Q9H7M6 989 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 AGTPBP1Q9UPW5 1226 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 RGS20O76081 388 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 PRPF6O94906 941 aaKnown RBP24.85■■□□□ 1.57
HOMER3-204ENST00000539827 KIF20AO95235 890 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 CCNE2O96020 404 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 HERVK_113P62684 666 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 MOGSQ13724 837 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 NCAPG2Q86XI2 1143 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 INPP4AQ96PE3 977 aaPredicted RBP24.85■■□□□ 1.57
HOMER3-204ENST00000539827 SPATC1LQ9H0A9 340 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 LCTP09848 1927 aa24.85■■□□□ 1.57
HOMER3-204ENST00000539827 CNMDO75829 334 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 GJA5P36382 358 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 DNM2P50570 870 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 FXR1P51114 621 aaKnown RBP eCLIP24.84■■□□□ 1.57
HOMER3-204ENST00000539827 MIIPQ5JXC2 388 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 C16orf45Q96MC5 204 aaPredicted RBP24.84■■□□□ 1.57
HOMER3-204ENST00000539827 MRPL44Q9H9J2 332 aaKnown RBP24.84■■□□□ 1.57
HOMER3-204ENST00000539827 TCEAL9Q9UHQ7 104 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 MFAP3LO75121 409 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 GAP43P17677 238 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 QARSP47897 775 aaKnown RBP24.84■■□□□ 1.57
HOMER3-204ENST00000539827 UGCGQ16739 394 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 LDLRAD1Q5T700 205 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 FOXR2Q6PJQ5 311 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 EPM2AIP1Q7L775 607 aaPredicted RBP24.84■■□□□ 1.57
HOMER3-204ENST00000539827 MYCT1Q8N699 235 aa24.84■■□□□ 1.57
HOMER3-204ENST00000539827 RNF225M0QZC1 329 aaPredicted RBP24.83■■□□□ 1.57
HOMER3-204ENST00000539827 FKBP3Q00688 224 aaKnown RBP24.83■■□□□ 1.57
HOMER3-204ENST00000539827 KRT76Q01546 638 aa24.83■■□□□ 1.57
HOMER3-204ENST00000539827 TBC1D8BQ0IIM8 1120 aa24.83■■□□□ 1.57
HOMER3-204ENST00000539827 MAF1Q9H063 256 aa24.83■■□□□ 1.57
HOMER3-204ENST00000539827 FBXO40Q9UH90 709 aa24.83■■□□□ 1.57
HOMER3-204ENST00000539827 A0A1W2PQC6 194 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 GCNT3O95395 438 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 TPM1P09493 284 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 ERCC3P19447 782 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 KCNJ6P48051 423 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 JAK3P52333 1124 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 FSTL1Q12841 308 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 PANX2Q96RD6 677 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 MOV10L1Q9BXT6 1211 aaKnown RBP24.82■■□□□ 1.56
HOMER3-204ENST00000539827 R3HDMLQ9H3Y0 253 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 KIAA1217Q5T5P2 1943 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 WDR64B1ANS9 1081 aa24.82■■□□□ 1.56
HOMER3-204ENST00000539827 SORBS3O60504 671 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms