RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 UNC45AQ9H3U1 944 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 SMARCAD1Q9H4L7 1026 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
VTN-202ENST00000539746 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
VTN-202ENST00000539746 MYH7BA7E2Y1 1941 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
VTN-202ENST00000539746 WNT7AO00755 349 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 ADAMTS3O15072 1205 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 SSBP05455 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
VTN-202ENST00000539746 PGK2P07205 417 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 KCNA2P16389 499 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 RFC5P40937 340 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 ZNF165P49910 485 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 CPT1AP50416 773 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 LACTBP83111 547 aaPredicted RBP13.12□□□□□ -0.31
VTN-202ENST00000539746 DPYDQ12882 1025 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 COBLL1Q53SF7 1204 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
VTN-202ENST00000539746 FOXR2Q6PJQ5 311 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 B3GNT9Q6UX72 402 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 PLPPR4Q7Z2D5 763 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 IL31RAQ8NI17 732 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 TRIM9Q9C026 710 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 FAM184BQ9ULE4 1060 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 PCDHA5Q9Y5H7 936 aa13.12□□□□□ -0.31
VTN-202ENST00000539746 IKBKBO14920 756 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 DHX15O43143 795 aaKnown RBP13.11□□□□□ -0.31
VTN-202ENST00000539746 MSCO60682 206 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 DGAT1O75907 488 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 SLITRK3O94933 977 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 CAPN2P17655 700 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 GUCY2CP25092 1073 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 AFMP43652 599 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 PSMC4P43686 418 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 SMTNP53814 917 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 ACTR2P61160 394 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 MDM2Q00987 491 aaPredicted RBP13.11□□□□□ -0.31
VTN-202ENST00000539746 GRIN1Q05586 938 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 SPAG1Q07617 926 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 GRB10Q13322 594 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 PPP2R5AQ15172 486 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
VTN-202ENST00000539746 CELF3Q5SZQ8 465 aaKnown RBP13.11□□□□□ -0.31
VTN-202ENST00000539746 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 PPTC7Q8NI37 304 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 GOLGA5Q8TBA6 731 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 AFAP1L1Q8TED9 768 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 SLC7A3Q8WY07 619 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
VTN-202ENST00000539746 SPATA33Q96N06 139 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 TSG101Q99816 390 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 KATNAL1Q9BW62 490 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 AP5M1Q9H0R1 490 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 ZNF302Q9NR11 478 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
VTN-202ENST00000539746 UBE4BO95155 1302 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 EMSYQ7Z589 1322 aa13.11□□□□□ -0.31
VTN-202ENST00000539746 POTEB3A0JP26 581 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 PPFIA4O75335 1185 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 ATG7O95352 703 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 GGPS1O95749 300 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 MAPTP10636 758 aaKnown RBP13.1□□□□□ -0.31
VTN-202ENST00000539746 UBA1P22314 1058 aaKnown RBP13.1□□□□□ -0.31
VTN-202ENST00000539746 YWHABP31946 246 aaKnown RBP13.1□□□□□ -0.31
VTN-202ENST00000539746 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
VTN-202ENST00000539746 DNM2P50570 870 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 ITGB3BPQ13352 177 aaPredicted RBP13.1□□□□□ -0.31
VTN-202ENST00000539746 PNOCQ13519 176 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 ACVR2BQ13705 512 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 DUSP28Q4G0W2 176 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 POTEBQ6S5H4 581 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 TCP11Q8WWU5 503 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 GLG1Q92896 1179 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 DYDC2Q96IM9 177 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 CTAGE1Q96RT6 745 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 MMTAG2Q9BU76 263 aaKnown RBP13.1□□□□□ -0.31
VTN-202ENST00000539746 ERAP1Q9NZ08 941 aa13.1□□□□□ -0.31
VTN-202ENST00000539746 CGNQ9P2M7 1197 aaKnown RBP13.1□□□□□ -0.31
VTN-202ENST00000539746 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 PP2D1A8MPX8 630 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
VTN-202ENST00000539746 CBFA2T2O43439 604 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 EDIL3O43854 480 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 FKTNO75072 461 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 FARP2O94887 1054 aaPredicted RBP13.09□□□□□ -0.31
VTN-202ENST00000539746 FAM13AO94988 1023 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 AKR1A1P14550 325 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 IDEP14735 1019 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 TAL1P17542 331 aaPredicted RBP13.09□□□□□ -0.31
VTN-202ENST00000539746 STAT5BP51692 787 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 RTP1P59025 263 aa13.09□□□□□ -0.31
VTN-202ENST00000539746 SNRPFP62306 86 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms