RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 MIS18BP1Q6P0N0 1132 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 CCDC62Q6P9F0 684 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 METTL7BQ6UX53 244 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 C4orf19Q8IY42 314 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 SYT2Q8N9I0 419 aaPredicted RBP13.78□□□□□ -0.2
DDB1-209ENST00000537877 BANK1Q8NDB2 785 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 FAM200AQ8TCP9 573 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 ATP6V0A1Q93050 837 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 KATNBL1Q9H079 304 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 NAT10Q9H0A0 1025 aaKnown RBP13.78□□□□□ -0.2
DDB1-209ENST00000537877 DNAJC25Q9H1X3 360 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 ABHD16BQ9H3Z7 469 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 BMP2KQ9NSY1 1161 aaPredicted RBP13.78□□□□□ -0.2
DDB1-209ENST00000537877 DACH1Q9UI36 760 aa13.78□□□□□ -0.2
DDB1-209ENST00000537877 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
DDB1-209ENST00000537877 PVALEFA0A1B0GWK0 134 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 MYMKA6NI61 221 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 ATG7O95352 703 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 GGPS1O95749 300 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 SNAI1O95863 264 aaPredicted RBP13.77□□□□□ -0.21
DDB1-209ENST00000537877 SSBP05455 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDB1-209ENST00000537877 SUPT20HL2P0C7V6 817 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 MRE11P49959 708 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 DHX8Q14562 1220 aaKnown RBP13.77□□□□□ -0.21
DDB1-209ENST00000537877 KIF22Q14807 665 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 DPCR1Q3MIW9 517 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 L1TD1Q5T7N2 865 aaKnown RBP13.77□□□□□ -0.21
DDB1-209ENST00000537877 ABHD15Q6UXT9 468 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 GPBP1Q86WP2 473 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 MLKLQ8NB16 471 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 RBSNQ9H1K0 784 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 KCND2Q9NZV8 630 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 WRAP73Q9P2S5 460 aaPredicted RBP13.77□□□□□ -0.21
DDB1-209ENST00000537877 DBR1Q9UK59 544 aaKnown RBP13.77□□□□□ -0.21
DDB1-209ENST00000537877 GJD2Q9UKL4 321 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 WDR81Q562E7 1941 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 IGSF9BQ9UPX0 1349 aa13.77□□□□□ -0.21
DDB1-209ENST00000537877 CASP8AP2Q9UKL3 1982 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 KLRC4O43908 158 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 RHOBTB3O94955 611 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 ARIH2O95376 493 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 TXNP10599 105 aaKnown RBP13.76□□□□□ -0.21
DDB1-209ENST00000537877 XRCC6P12956 609 aaKnown RBP eCLIP13.76□□□□□ -0.21
DDB1-209ENST00000537877 CYP11B2P19099 503 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 ZNF165P49910 485 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 PSMC6P62333 389 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 LY6KQ17RY6 165 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 CT47A1Q5JQC4 288 aaPredicted RBP13.76□□□□□ -0.21
DDB1-209ENST00000537877 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
DDB1-209ENST00000537877 TAPT1Q6NXT6 567 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 C11orf57Q6ZUT1 292 aaPredicted RBP13.76□□□□□ -0.21
DDB1-209ENST00000537877 UNC13DQ70J99 1090 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 DDX12PQ92771 950 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 BPIFA3Q9BQP9 254 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 BHMT2Q9H2M3 363 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 MLXIPQ9HAP2 919 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 GRPEL1Q9HAV7 217 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 EXOC1Q9NV70 894 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
DDB1-209ENST00000537877 IGKV6D-21A0A0A0MT36 114 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 NKRFO15226 690 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDB1-209ENST00000537877 XRCC5P13010 732 aaKnown RBP13.75□□□□□ -0.21
DDB1-209ENST00000537877 PSMC4P43686 418 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 SP4Q02446 784 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 SP3Q02447 781 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 UGCGQ16739 394 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 KMT5BQ4FZB7 885 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 ZNF658Q5TYW1 1059 aaPredicted RBP13.75□□□□□ -0.21
DDB1-209ENST00000537877 CCDC60Q8IWA6 550 aaPredicted RBP13.75□□□□□ -0.21
DDB1-209ENST00000537877 DHX37Q8IY37 1157 aaKnown RBP13.75□□□□□ -0.21
DDB1-209ENST00000537877 PIGOQ8TEQ8 1089 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 SEPT1Q8WYJ6 367 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 TRIM47Q96LD4 638 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 BCAS3Q9H6U6 928 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 CBX8Q9HC52 389 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 ANKEF1Q9NU02 776 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 RNF186Q9NXI6 227 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 GABBR1Q9UBS5 961 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 DOCK3Q8IZD9 2030 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 ARID2Q68CP9 1835 aa13.75□□□□□ -0.21
DDB1-209ENST00000537877 A0A087WWV3 80 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 ARHGEF35A5YM69 484 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 NOP56O00567 594 aaKnown RBP13.74□□□□□ -0.21
DDB1-209ENST00000537877 TBC1D8O95759 1140 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 GH1P01241 217 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 BMP6P22004 513 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 CTGFP29279 349 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 PPP1R2P41236 205 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 ACVR2BQ13705 512 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 UVSSAQ2YD98 709 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 FAM160B1Q5W0V3 765 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 ISM2Q6H9L7 571 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 DYMQ7RTS9 669 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 CCDC65Q8IXS2 484 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 RNF214Q8ND24 703 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 EMID1Q96A84 441 aaPredicted RBP13.74□□□□□ -0.21
DDB1-209ENST00000537877 DNAJC19Q96DA6 116 aa13.74□□□□□ -0.21
DDB1-209ENST00000537877 CCDC43Q96MW1 224 aaKnown RBP13.74□□□□□ -0.21
DDB1-209ENST00000537877 PDGFCQ9NRA1 345 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms