RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 PCYT2Q99447 389 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 IFIH1Q9BYX4 1025 aaKnown RBP10.17□□□□□ -0.78
COPB1-211ENST00000534234 SUGCTQ9HAC7 445 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 TUBE1Q9UJT0 475 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 MYH6P13533 1939 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 NFASCO94856 1347 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 SCN5AQ14524 2016 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.16□□□□□ -0.78
COPB1-211ENST00000534234 MBLAC1A4D2B0 266 aaPredicted RBP10.16□□□□□ -0.78
COPB1-211ENST00000534234 RRN3P2A6NIE6 340 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 PRPF3O43395 683 aaKnown RBP10.16□□□□□ -0.78
COPB1-211ENST00000534234 ATXN8OSP0DMR3 200 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 RPS6KB1P23443 525 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 PSMA5P28066 241 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 CLK2P49760 499 aaKnown RBP10.16□□□□□ -0.78
COPB1-211ENST00000534234 STAT5BP51692 787 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 ACTR2P61160 394 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 HTRA4P83105 476 aaPredicted RBP10.16□□□□□ -0.78
COPB1-211ENST00000534234 TFF2Q03403 129 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 ITGB3BPQ13352 177 aaPredicted RBP10.16□□□□□ -0.78
COPB1-211ENST00000534234 FBXL16Q8N461 479 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 IL27Q8NEV9 243 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 DNAJB3Q8WWF6 145 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 AGO4Q9HCK5 861 aaKnown RBP10.16□□□□□ -0.78
COPB1-211ENST00000534234 C6orf50Q9HD87 102 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
COPB1-211ENST00000534234 ATG7O95352 703 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 GHRP10912 638 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 AKAP17AQ02040 695 aaKnown RBP10.15□□□□□ -0.78
COPB1-211ENST00000534234 PKN1Q16512 942 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 AAK1Q2M2I8 961 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 PLPPR4Q7Z2D5 763 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 PLA2G4DQ86XP0 818 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 GDPD5Q8WTR4 605 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 CCDC12Q8WUD4 166 aaPredicted RBP10.15□□□□□ -0.78
COPB1-211ENST00000534234 PHKBQ93100 1093 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 AGXT2Q9BYV1 514 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 ZMYND12Q9H0C1 365 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 TRPC6Q9Y210 931 aa10.15□□□□□ -0.78
COPB1-211ENST00000534234 PRUNE2Q8WUY3 3088 aa10.15□□□□□ -0.79
COPB1-211ENST00000534234 ESYT2A0FGR8 921 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 FAM86B1E9PN63 330 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 DDX39AO00148 427 aaKnown RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 TNFRSF10AO00220 468 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 ADAMTS3O15072 1205 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 PPFIA3O75145 1194 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 CYP3A4P08684 503 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 FAM86B2P0C5J1 330 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 BMP1P13497 986 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 GNA11P29992 359 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 LPIN1Q14693 890 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 PLCB4Q15147 1175 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 NTRK3Q16288 839 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 MCTP2Q6DN12 878 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 NIPA1Q7RTP0 329 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 SP7Q8TDD2 431 aaPredicted RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 ADAMTS19Q8TE59 1207 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 CRYGNQ8WXF5 182 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 ZBTB10Q96DT7 871 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 YME1L1Q96TA2 773 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 C17orf80Q9BSJ5 609 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 FAM49AQ9H0Q0 323 aaPredicted RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 COG5Q9UP83 839 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 CDY2AQ9Y6F7 541 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 TET1Q8NFU7 2136 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 VCANP13611 3396 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 IGLV3-22A0A075B6J6 115 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 IPO5O00410 1097 aaKnown RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 ENPP3O14638 875 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 BACH1O14867 736 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 DHX15O43143 795 aaKnown RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 EPB41L2O43491 1005 aaKnown RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 CCNE2O96020 404 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 RPLP2P05387 115 aaKnown RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 PDIA3P30101 505 aaKnown RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 SLC26A2P50443 739 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 EVCP57679 992 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 CCT2P78371 535 aaKnown RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 MRPS6P82932 125 aaKnown RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 MGAT3Q09327 533 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 FBXO47Q5MNV8 452 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 IER5Q5VY09 327 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 ABHD15Q6UXT9 468 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 RUFY3Q7L099 469 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 REXO1Q8N1G1 1221 aaKnown RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 FBXO22Q8NEZ5 403 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 TRAPPC12Q8WVT3 735 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 HLA-CQ95604 372 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 UIMC1Q96RL1 719 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 RNF26Q9BY78 433 aaPredicted RBP10.14□□□□□ -0.79
COPB1-211ENST00000534234 ZSWIM6Q9HCJ5 1215 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 PCDHA2Q9Y5H9 948 aa10.14□□□□□ -0.79
COPB1-211ENST00000534234 TANC1Q9C0D5 1861 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 IGKV6D-21A0A0A0MT36 114 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 IFNAR1P17181 557 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 KCNQ1P51787 676 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 TMEM62Q0P6H9 643 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 EPC2Q52LR7 807 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms