RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 ZNF556Q9HAH1 456 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 TMEM161AQ9NX61 479 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 SYNJ2BP-COX16A0A087WUM0 186 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 ZNF233A6NK53 670 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 DNALI1O14645 258 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-231ENST00000532463 CLASP2O75122 1294 aaKnown RBP8.7□□□□□ -1.02
CTNND1-231ENST00000532463 MYCLP12524 364 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-231ENST00000532463 MAPK4P31152 587 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 MLH1P40692 756 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 LIG4P49917 911 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 CASP8Q14790 479 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 MAPRE1Q15691 268 aaKnown RBP8.7□□□□□ -1.02
CTNND1-231ENST00000532463 BBS9Q3SYG4 887 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 ARMC3Q5W041 872 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 KRT39Q6A163 491 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 KLHL24Q6TFL4 600 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 NDUFAF2Q8N183 169 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 SLC35F6Q8N357 371 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 PPM1KQ8N3J5 372 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 ARHGAP45Q92619 1136 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 LRRC39Q96DD0 335 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 MMTAG2Q9BU76 263 aaKnown RBP8.7□□□□□ -1.02
CTNND1-231ENST00000532463 ECT2Q9H8V3 914 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 COX16Q9P0S2 106 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 STK17AQ9UEE5 414 aa8.7□□□□□ -1.02
CTNND1-231ENST00000532463 TARSL2A2RTX5 802 aaKnown RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 PSMA4P25789 261 aaKnown RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 CDC27P30260 824 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 ARFIP2P53365 341 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 MFAP3P55082 362 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 PPP4R3CPQ6ZMV5 832 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 CLMNQ96JQ2 1002 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 ARHGEF10LQ9HCE6 1279 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 GPCPD1Q9NPB8 672 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 GINM1Q9NU53 330 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 IVNS1ABPQ9Y6Y0 642 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 TK2O00142 265 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 MAP3K13O43283 966 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 AFPP02771 609 aaKnown RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 NUP107P57740 925 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 COPS2P61201 443 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 HINFPQ9BQA5 517 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 SEL1LQ9UBV2 794 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 CLEC11AQ9Y240 323 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 DMRT2Q9Y5R5 561 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 WDR64B1ANS9 1081 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 ARIH2O95376 493 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 KRT1P04264 644 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 GRM1Q13255 1194 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 HIC1Q14526 733 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 THOC1Q96FV9 657 aaKnown RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 MEIS3Q99687 375 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 HACD3Q9P035 362 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 SLC8A2Q9UPR5 921 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 CAMSAP2Q08AD1 1489 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 MRC2Q9UBG0 1479 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 SAC3D1A6NKF1 404 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 LRRIQ3A6PVS8 624 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 RPS6KB1P23443 525 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 HDLBPQ00341 1268 aaKnown RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 TERF2Q15554 542 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 TTLL7Q6ZT98 887 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 RSRC2Q7L4I2 434 aaKnown RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 LZTS2Q9BRK4 669 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 IQSEC3Q9UPP2 1182 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 ZNF839A8K0R7 811 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 ATP2B4P23634 1241 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 TMEM154Q6P9G4 183 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 EPM2AIP1Q7L775 607 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 FAM81BQ96LP2 452 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 BLZF1Q9H2G9 400 aa8.69□□□□□ -1.02
CTNND1-231ENST00000532463 FAM32AQ9Y421 112 aaKnown RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 V9GY48 417 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-231ENST00000532463 TBKBP1A7MCY6 615 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 DDX39AO00148 427 aaKnown RBP8.68□□□□□ -1.02
CTNND1-231ENST00000532463 TEX28O15482 410 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 IKBIPQ70UQ0 350 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 STX12Q86Y82 276 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 STAG2Q8N3U4 1231 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 MAGEB6Q8N7X4 407 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 MDM1Q8TC05 714 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 NARS2Q96I59 477 aaKnown RBP8.68□□□□□ -1.02
CTNND1-231ENST00000532463 PPP1R13BQ96KQ4 1090 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 MBIPQ9NS73 344 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 AURKCQ9UQB9 309 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 KDRP35968 1356 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 GOLGA8JA6NMD2 632 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 GOLGA8TH3BQL2 631 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 GCFC2P16383 781 aaKnown RBP8.68□□□□□ -1.02
CTNND1-231ENST00000532463 IL12RB1P42701 662 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 SERPINH1P50454 418 aaKnown RBP8.68□□□□□ -1.02
CTNND1-231ENST00000532463 ABCE1P61221 599 aaKnown RBP8.68□□□□□ -1.02
CTNND1-231ENST00000532463 CENPPQ6IPU0 288 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
CTNND1-231ENST00000532463 ANKRD44Q8N8A2 993 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 GRAMD1AQ96CP6 724 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 CCT7Q99832 543 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 MYLK2Q9H1R3 596 aa8.68□□□□□ -1.02
CTNND1-231ENST00000532463 MRPL47Q9HD33 250 aaKnown RBP8.68□□□□□ -1.02
CTNND1-231ENST00000532463 FBXL5Q9UKA1 691 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms