RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, human

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF12-208	ENST00000529970	TTC41P	Q6P2S7	1318 aa		4.75	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	HIP1	O00291	1037 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ARHGEF15	O94989	841 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	HOXB8	P17481	243 aa	Predicted RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	PSMA5	P28066	241 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	PSEN2	P49810	448 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	GYS2	P54840	703 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	VCP	P55072	806 aa	Known RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ADAM15	Q13444	863 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	CCDC96	Q2M329	555 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	C4orf46	Q504U0	113 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	CCDC183	Q5T5S1	534 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	MYSM1	Q5VVJ2	828 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	LARP1B	Q659C4	914 aa	Known RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	RCSD1	Q6JBY9	416 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ELMSAN1	Q6PJG2	1045 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	BLOC1S2	Q6QNY1	142 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	NOP9	Q86U38	636 aa	Known RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	NT5DC4	Q86YG4	428 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	DNER	Q8NFT8	737 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	P2RX5	Q93086	422 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	DYNLL2	Q96FJ2	89 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	RIOK1	Q9BRS2	568 aa	Known RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	RIPK3	Q9Y572	518 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	RBM8A	Q9Y5S9	174 aa	Known RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	SLC4A4	Q9Y6R1	1079 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	PLA2G6	O60733	806 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	MBD4	O95243	580 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	MMP1	P03956	469 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	SYT1	P21579	422 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ALDH5A1	P51649	535 aa	Predicted RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	IRX5	P78411	483 aa	Predicted RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	PTH1R	Q03431	593 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	HYAL1	Q12794	435 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	NMI	Q13287	307 aa	Predicted RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	LAMC2	Q13753	1193 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	CTC1	Q2NKJ3	1217 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	SLFNL1	Q499Z3	407 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	KIAA1755	Q5JYT7	1200 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	TAPT1	Q6NXT6	567 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	KCNV1	Q6PIU1	500 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	RUBCN	Q92622	972 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	NUP88	Q99567	741 aa	Predicted RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	LSG1	Q9H089	658 aa	Known RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	NCDN	Q9UBB6	729 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	USP25	Q9UHP3	1055 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	PUF60	Q9UHX1	559 aa	Known RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	FBXL21	Q9UKT6	434 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ZMIZ1	Q9ULJ6	1067 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	USP15	Q9Y4E8	981 aa	Predicted RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ZNF532	Q9HCE3	1301 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ZDBF2	Q9HCK1	2354 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	BDP1	A6H8Y1	2624 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	C5orf67	F2Z3F1	127 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ADCY6	O43306	1168 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	F13A1	P00488	732 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	TSPY3	P0CV98	308 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	TSPY8	P0CW00	308 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	THPO	P40225	353 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	MTHFR	P42898	656 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	UBE3A	Q05086	875 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	RUFY3	Q7L099	469 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	DRC7	Q8IY82	874 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	SDR42E1	Q8WUS8	393 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	FAM227B	Q96M60	508 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ALG1	Q9BT22	464 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	PDGFC	Q9NRA1	345 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	FAM13B	Q9NYF5	915 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	MAP3K20	Q9NYL2	800 aa	Known RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	CYP39A1	Q9NYL5	469 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	GTF2IRD1	Q9UHL9	959 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	KLF15	Q9UIH9	416 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	CDV3	Q9UKY7	258 aa	Known RBP	4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	LRFN2	Q9ULH4	789 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	PCDHB12	Q9Y5F1	795 aa		4.74	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	CCDC171	Q6TFL3	1326 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970		H3BQV1	296 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	STK10	O94804	968 aa	Known RBP	4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	CYP2D6	P10635	497 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	GNAT2	P19087	354 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	LMNB2	Q03252	620 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	DNM1	Q05193	864 aa	Known RBP	4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	MFSD10	Q14728	455 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ODR4	Q5SWX8	454 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	SPOUT1	Q5T280	376 aa	Known RBP	4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	RNF207	Q6ZRF8	634 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	CLEC10A	Q8IUN9	316 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	DBF4B	Q8NFT6	615 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	GMCL1	Q96IK5	515 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ARMT1	Q9H993	441 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ADGRA3	Q8IWK6	1321 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	LETM1	O95202	739 aa	Predicted RBP	4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	IBSP	P21815	317 aa	Predicted RBP	4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	CALML3	P27482	149 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	TDO2	P48775	406 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	UBE2H	P62256	183 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	TRAF1	Q13077	416 aa		4.73	□□□□□ -1.65
ARHGEF12-208	ENST00000529970	ADCK5	Q3MIX3	580 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms