RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 SCN4AP35499 1836 aa17.13■□□□□ 0.33
CCDC90B-213ENST00000529611 A0A1W2PQC6 194 aa17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 TESPA1A2RU30 521 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 ATP9AO75110 1047 aa17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 MFAP3LO75121 409 aa17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 CASP5P51878 434 aa17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 TTLL12Q14166 644 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 MIIPQ5JXC2 388 aa17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 NSUN6Q8TEA1 469 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 C16orf45Q96MC5 204 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 PANX2Q96RD6 677 aa17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 BAG1Q99933 345 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 MAF1Q9H063 256 aa17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 TRMT1Q9NXH9 659 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 R3HCC1Q9Y3T6 440 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC90B-213ENST00000529611 B4DLN1 442 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 CXCL11O14625 94 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 STX10O60499 249 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 PEX10O60683 326 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 FGFR1OPO95684 399 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 P4HBP07237 508 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 CASP14P31944 242 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 MTIF2P46199 727 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 FXR1P51114 621 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 NELFCDQ8IXH7 590 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 CPLX3Q8WVH0 158 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 INPP4AQ96PE3 977 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 BTBD7Q9P203 1132 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 KCNH4Q9UQ05 1017 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 LCTP09848 1927 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 PES1O00541 588 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 ARHGAP6O43182 974 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 TBCAO75347 108 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 KIF20AO95235 890 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 DNM2P50570 870 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 EPM2AIP1Q7L775 607 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 CHST13Q8NET6 341 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 GPRASP2Q96D09 838 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 BCAS3Q9H6U6 928 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 COL4A3BPQ9Y5P4 624 aa17.11■□□□□ 0.33
CCDC90B-213ENST00000529611 LOXHD1Q8IVV2 1947 aa17.1■□□□□ 0.33
CCDC90B-213ENST00000529611 IQCA1LA6NCM1 817 aa17.1■□□□□ 0.33
CCDC90B-213ENST00000529611 TPM2P07951 284 aa17.1■□□□□ 0.33
CCDC90B-213ENST00000529611 FKBP3Q00688 224 aaKnown RBP17.1■□□□□ 0.33
CCDC90B-213ENST00000529611 PPIL2Q13356 520 aa17.1■□□□□ 0.33
CCDC90B-213ENST00000529611 TRIM14Q14142 442 aa17.1■□□□□ 0.33
CCDC90B-213ENST00000529611 CNGA4Q8IV77 575 aa17.1■□□□□ 0.33
CCDC90B-213ENST00000529611 NOC4LQ9BVI4 516 aaKnown RBP17.1■□□□□ 0.33
CCDC90B-213ENST00000529611 ZSWIM4Q9H7M6 989 aa17.1■□□□□ 0.33
CCDC90B-213ENST00000529611 RGS20O76081 388 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 GAP43P17677 238 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 RIOX2Q8IUF8 465 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 OLFML3Q9NRN5 406 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 KCND2Q9NZV8 630 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 SAMM50Q9Y512 469 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 RNF225M0QZC1 329 aaPredicted RBP17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 TRAF5O00463 557 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 GRIN3BO60391 1043 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 CCNE2O96020 404 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 MYBP10242 640 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 HOXD13P35453 343 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 IRX3P78415 501 aaPredicted RBP17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 NYAP1Q6ZVC0 841 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 NLRX1Q86UT6 975 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 OPTNQ96CV9 577 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 ASCC2Q9H1I8 757 aaPredicted RBP17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 KIAA1217Q5T5P2 1943 aa17.09■□□□□ 0.33
CCDC90B-213ENST00000529611 SFI1A8K8P3 1242 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 MAFGO15525 162 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 FAM13AO94988 1023 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 TPM1P09493 284 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 QARSP47897 775 aaKnown RBP17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 KRT76Q01546 638 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 TBC1D8BQ0IIM8 1120 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 MOGSQ13724 837 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 BMT2Q1RMZ1 405 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 ARMC9Q7Z3E5 817 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 ZC3H3Q8IXZ2 948 aaKnown RBP17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 CCDC51Q96ER9 411 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 PPP1R13BQ96KQ4 1090 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 CEP63Q96MT8 703 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 SPATC1LQ9H0A9 340 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 MRPL44Q9H9J2 332 aaKnown RBP17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 AGTPBP1Q9UPW5 1226 aa17.08■□□□□ 0.33
CCDC90B-213ENST00000529611 ARHGEF35A5YM69 484 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 WDR64B1ANS9 1081 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 LYPLA2O95372 231 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 TNNT1P13805 278 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 FECHP22830 423 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 GUCY2CP25092 1073 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 JAK3P52333 1124 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 ZNF131P52739 623 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 MAN2A1Q16706 1144 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 EDRF1Q3B7T1 1238 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
CCDC90B-213ENST00000529611 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms