RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 DCAF4Q8WV16 495 aa9.72□□□□□ -0.85
CASC9-204ENST00000523313 AGO3Q9H9G7 860 aaKnown RBP9.72□□□□□ -0.85
CASC9-204ENST00000523313 AAASQ9NRG9 546 aa9.72□□□□□ -0.85
CASC9-204ENST00000523313 TMEM260Q9NX78 707 aa9.72□□□□□ -0.85
CASC9-204ENST00000523313 PCDHB12Q9Y5F1 795 aa9.72□□□□□ -0.85
CASC9-204ENST00000523313 HCFC2Q9Y5Z7 792 aa9.72□□□□□ -0.85
CASC9-204ENST00000523313 EOMESO95936 686 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 LGALS2P05162 132 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 CFHP08603 1231 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 CT47B1P0C2W7 299 aaPredicted RBP9.71□□□□□ -0.86
CASC9-204ENST00000523313 EIF2AK2P19525 551 aaKnown RBP9.71□□□□□ -0.86
CASC9-204ENST00000523313 TGM1P22735 817 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 MTHFRP42898 656 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 ADAM17P78536 824 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 ARHGAP4P98171 946 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 SP2Q02086 613 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 ITIH3Q06033 890 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 FBXO47Q5MNV8 452 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 RARS2Q5T160 578 aaKnown RBP9.71□□□□□ -0.86
CASC9-204ENST00000523313 PDE12Q6L8Q7 609 aaKnown RBP9.71□□□□□ -0.86
CASC9-204ENST00000523313 C1orf210Q8IVY1 113 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 THNSL1Q8IYQ7 743 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 RHPN1Q8TCX5 695 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 LMBR1Q8WVP7 490 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 FRAT1Q92837 279 aaPredicted RBP9.71□□□□□ -0.86
CASC9-204ENST00000523313 CASP10Q92851 521 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 RMDN3Q96TC7 470 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 TCF25Q9BQ70 676 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 BCAS3Q9H6U6 928 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 CYP26B1Q9NR63 512 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 DLGAP2Q9P1A6 1054 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 DBR1Q9UK59 544 aaKnown RBP9.71□□□□□ -0.86
CASC9-204ENST00000523313 USP18Q9UMW8 372 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 WDR19Q8NEZ3 1342 aa9.71□□□□□ -0.86
CASC9-204ENST00000523313 ANKRD11Q6UB99 2663 aaPredicted RBP9.71□□□□□ -0.86
CASC9-204ENST00000523313 KIAA1217Q5T5P2 1943 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 EIF3JO75822 258 aaKnown RBP9.7□□□□□ -0.86
CASC9-204ENST00000523313 NR3C2P08235 984 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 IFIT2P09913 472 aaKnown RBP9.7□□□□□ -0.86
CASC9-204ENST00000523313 RFX1P22670 979 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 CD52P31358 61 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 ARHGEF16Q5VV41 709 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 KIAA1841Q6NSI8 718 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 MAML2Q8IZL2 1156 aaPredicted RBP9.7□□□□□ -0.86
CASC9-204ENST00000523313 GPR161Q8N6U8 529 aaKnown RBP9.7□□□□□ -0.86
CASC9-204ENST00000523313 RGS22Q8NE09 1264 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 OSBP2Q969R2 916 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 IWS1Q96ST2 819 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 TBC1D17Q9HA65 648 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 KCNK12Q9HB15 430 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 PARD6AQ9NPB6 346 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 ENTPD7Q9NQZ7 604 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 ANGPTL2Q9UKU9 493 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 CA14Q9ULX7 337 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 USTQ9Y2C2 406 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 FANCMQ8IYD8 2048 aa9.7□□□□□ -0.86
CASC9-204ENST00000523313 ASPMQ8IZT6 3477 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 TSPY2A6NKD2 308 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 MYH7BA7E2Y1 1941 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 ZIC2O95409 532 aaPredicted RBP9.69□□□□□ -0.86
CASC9-204ENST00000523313 APPP05067 770 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 STAG3L1P0CL83 205 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 GNAT1P11488 350 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 ATP5JP18859 108 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 UBA1P22314 1058 aaKnown RBP9.69□□□□□ -0.86
CASC9-204ENST00000523313 ZSCAN25Q6NSZ9 544 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 CEP85Q6P2H3 762 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 TSHZ1Q6ZSZ6 1077 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 CLASRPQ8N2M8 674 aaKnown RBP9.69□□□□□ -0.86
CASC9-204ENST00000523313 COLGALT1Q8NBJ5 622 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 GPKOWQ92917 476 aaPredicted RBP eCLIP9.69□□□□□ -0.86
CASC9-204ENST00000523313 ZFP91Q96JP5 570 aaPredicted RBP9.69□□□□□ -0.86
CASC9-204ENST00000523313 CDY2AQ9Y6F7 541 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 SPEGQ15772 3267 aa9.69□□□□□ -0.86
CASC9-204ENST00000523313 TBKBP1A7MCY6 615 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 M0R2C6 588 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 IPO8O15397 1037 aaKnown RBP9.68□□□□□ -0.86
CASC9-204ENST00000523313 GPAA1O43292 621 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 LRRN2O75325 713 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 SCG2P13521 617 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 GLULP15104 373 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 NOVP48745 357 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 PPARAQ07869 468 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 XRRA1Q6P2D8 792 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 IFNL3Q8IZI9 196 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 RSAD2Q8WXG1 361 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 MRPS27Q92552 414 aaKnown RBP9.68□□□□□ -0.86
CASC9-204ENST00000523313 CPVLQ9H3G5 476 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 MLXIPQ9HAP2 919 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 PXMP2Q9NR77 195 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 TYW1Q9NV66 732 aaKnown RBP9.68□□□□□ -0.86
CASC9-204ENST00000523313 WNT16Q9UBV4 365 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 PNMA2Q9UL42 364 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 LRFN2Q9ULH4 789 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 SMG5Q9UPR3 1016 aaKnown RBP9.68□□□□□ -0.86
CASC9-204ENST00000523313 TELO2Q9Y4R8 837 aa9.68□□□□□ -0.86
CASC9-204ENST00000523313 FRYQ5TBA9 3013 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms