RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ULK1O75385 1050 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 KRT37O76014 449 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 LRG1P02750 347 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 KIF11P52732 1056 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 GRIN1Q05586 938 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 STAT4Q14765 748 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 ATP13A4Q4VNC1 1196 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 CPZQ66K79 652 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 TEPPQ6URK8 271 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 NECAB2Q7Z6G3 386 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 NME9Q86XW9 330 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 ZZZ3Q8IYH5 903 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 PRPF38AQ8NAV1 312 aaKnown RBP6.23□□□□□ -1.41
SQLE-202ENST00000518604 MZB1Q8WU39 189 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 TYW1Q9NV66 732 aaKnown RBP6.23□□□□□ -1.41
SQLE-202ENST00000518604 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.22□□□□□ -1.41
SQLE-202ENST00000518604 DVL2O14641 736 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 N4BP3O15049 544 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 FOXP2O15409 715 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 ENO2P09104 434 aaPredicted RBP6.22□□□□□ -1.41
SQLE-202ENST00000518604 PHC1P78364 1004 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 SEC23AQ15436 765 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 CR1LQ2VPA4 569 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 B3GNT8Q7Z7M8 397 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 SPATS2Q86XZ4 545 aaKnown RBP6.22□□□□□ -1.41
SQLE-202ENST00000518604 FAM126AQ9BYI3 521 aaPredicted RBP6.22□□□□□ -1.41
SQLE-202ENST00000518604 BCAS3Q9H6U6 928 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 EMC7Q9NPA0 242 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 SPTLC3Q9NUV7 552 aa6.22□□□□□ -1.41
SQLE-202ENST00000518604 PRAMEF25A6NGN4 478 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 LSP1P33241 339 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 CDR1P51861 262 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 SESN3P58005 492 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 ADCY1Q08828 1119 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 DBPQ10586 325 aaPredicted RBP6.21□□□□□ -1.42
SQLE-202ENST00000518604 LRRC32Q14392 662 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 TMEM132BQ14DG7 1078 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 EPHA7Q15375 998 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 FSTL4Q6MZW2 842 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 CD300LDQ6UXZ3 194 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 KCNN1Q92952 543 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 E2F7Q96AV8 911 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 FAM84AQ96KN4 292 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 ELF4Q99607 663 aaPredicted RBP6.21□□□□□ -1.42
SQLE-202ENST00000518604 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 PUS7LQ9H0K6 701 aaKnown RBP6.21□□□□□ -1.42
SQLE-202ENST00000518604 ASB1Q9Y576 335 aa6.21□□□□□ -1.42
SQLE-202ENST00000518604 PPM1GO15355 546 aaPredicted RBP6.2□□□□□ -1.42
SQLE-202ENST00000518604 TGM5O43548 720 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 HMGB1P09429 215 aaKnown RBP6.2□□□□□ -1.42
SQLE-202ENST00000518604 CYP2C8P10632 490 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 SLC9A1P19634 815 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 IGFBP6P24592 240 aaPredicted RBP6.2□□□□□ -1.42
SQLE-202ENST00000518604 CDKN1CP49918 316 aaPredicted RBP6.2□□□□□ -1.42
SQLE-202ENST00000518604 DLG4P78352 724 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 SMAD3P84022 425 aaKnown RBP6.2□□□□□ -1.42
SQLE-202ENST00000518604 SMAD2Q15796 467 aaKnown RBP6.2□□□□□ -1.42
SQLE-202ENST00000518604 RGL3Q3MIN7 710 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 CATSPEREQ5SY80 951 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 RPUSD2Q8IZ73 545 aaKnown RBP6.2□□□□□ -1.42
SQLE-202ENST00000518604 ZNF610Q8N9Z0 462 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 SLC5A5Q92911 643 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 C16orf92Q96LL3 132 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 TMEM209Q96SK2 561 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 GCM1Q9NP62 436 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 TOMM22Q9NS69 142 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 HOMER2Q9NSB8 354 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 SLC5A4Q9NY91 659 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 H2AFY2Q9P0M6 372 aaPredicted RBP6.2□□□□□ -1.42
SQLE-202ENST00000518604 USP36Q9P275 1121 aaKnown RBP6.2□□□□□ -1.42
SQLE-202ENST00000518604 FAN1Q9Y2M0 1017 aa6.2□□□□□ -1.42
SQLE-202ENST00000518604 FARP2O94887 1054 aaPredicted RBP6.19□□□□□ -1.42
SQLE-202ENST00000518604 C8BP07358 591 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 ATF2P15336 505 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 GLDCP23378 1020 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 CD40P25942 277 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 AOAHP28039 575 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 STAT5AP42229 794 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 ID4P47928 161 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 TERF2Q15554 542 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 DDB1Q16531 1140 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 CD276Q5ZPR3 534 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 IQSEC1Q6DN90 963 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 VASNQ6EMK4 673 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 RASSF3Q86WH2 238 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 IGDCC3Q8IVU1 814 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 BHLHE22Q8NFJ8 381 aaPredicted RBP6.19□□□□□ -1.42
SQLE-202ENST00000518604 ASB15Q8WXK1 588 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 GBP4Q96PP9 640 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 ARHGAP28Q9P2N2 729 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 PLA2G2DQ9UNK4 145 aa6.19□□□□□ -1.42
SQLE-202ENST00000518604 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.18□□□□□ -1.42
SQLE-202ENST00000518604 GOLGA6L22H0YM25 854 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 TMEM253P0C7T8 217 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 MED14OSP0DP75 135 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 GUCY2FP51841 1108 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 TMPRSS15P98073 1019 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 FOXO4P98177 505 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 MESP2Q0VG99 397 aa6.18□□□□□ -1.42
SQLE-202ENST00000518604 PROSER1Q86XN7 944 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms