RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 IL25Q9H293 177 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 CNNM2Q9H8M5 875 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 SENP2Q9HC62 589 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 DCHS1Q96JQ0 3298 aa13.12□□□□□ -0.31
CTNNA1-205ENST00000517904 PNMA6FA0A0J9YX94 578 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 LOC730098B7Z3J9 87 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 GLP2RO95838 553 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 TCF7P36402 384 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 PTPN5P54829 565 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 ZXDAP98168 799 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 MARCH8Q5T0T0 291 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 RTN4RL1Q86UN2 441 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 SPPL3Q8TCT6 385 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 ZBTB10Q96DT7 871 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 SENP7Q9BQF6 1050 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 AGO3Q9H9G7 860 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 DIAPH3Q9NSV4 1193 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 TUBE1Q9UJT0 475 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 BARX2Q9UMQ3 279 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 PCDHGC5Q9Y5F6 944 aa13.11□□□□□ -0.31
CTNNA1-205ENST00000517904 PLXNA4Q9HCM2 1894 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 MBLAC1A4D2B0 266 aaPredicted RBP13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 ATP9AO75110 1047 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 MARK3P27448 753 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 CD52P31358 61 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 NRIP1P48552 1158 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 COASYQ13057 564 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 TRAF1Q13077 416 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 GRIK4Q16099 956 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 PCNX4Q63HM2 1172 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 TSHZ1Q6ZSZ6 1077 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 PLEKHM2Q8IWE5 1019 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 KLHL23Q8NBE8 558 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 DNAJB3Q8WWF6 145 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 CDY2AQ9Y6F7 541 aa13.1□□□□□ -0.31
CTNNA1-205ENST00000517904 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 GSTTP1A0A1W2PQM5 241 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 ST18O60284 1047 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 TROAPQ12815 778 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 PAN2Q504Q3 1202 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 USP17L6PQ6QN14 398 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 CMTR2Q8IYT2 770 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 FBXL6Q8N531 539 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 POF1BQ8WVV4 589 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 PIBF1Q8WXW3 757 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 PPP2R3CQ969Q6 453 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 USP15Q9Y4E8 981 aaPredicted RBP13.09□□□□□ -0.31
CTNNA1-205ENST00000517904 MEIS2O14770 477 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 KCNA2P16389 499 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 GATMP50440 423 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 MRPS6P82932 125 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 PKN1Q16512 942 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 NAALADL2Q58DX5 795 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 B4GALNT3Q6L9W6 998 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 NPAS4Q8IUM7 802 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 ASIC4Q96FT7 647 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 FAM86C1Q9NVL1 165 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 ERAP1Q9NZ08 941 aa13.08□□□□□ -0.32
CTNNA1-205ENST00000517904 IGBP1P78318 339 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 TMEM62Q0P6H9 643 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 NLRX1Q86UT6 975 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 SMC5Q8IY18 1101 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 GIMAP8Q8ND71 665 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 VN1R2Q8NFZ6 395 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 SMARCC2Q8TAQ2 1214 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 SEPT1Q8WYJ6 367 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 RPGRIP1Q96KN7 1286 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 PRRX2Q99811 253 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 PHF7Q9BWX1 381 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 FAM49AQ9H0Q0 323 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 PADI3Q9ULW8 664 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
CTNNA1-205ENST00000517904 RIF1Q5UIP0 2472 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 PTPRZ1P23471 2315 aaPredicted RBP13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 HIP1O00291 1037 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 PIK3CDO00329 1044 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 PER2O15055 1255 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 PPFIA3O75145 1194 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 SCG2P13521 617 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 INSRRP14616 1297 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 ITGB5P18084 799 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 SIGLEC14Q08ET2 396 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 ATP8B4Q8TF62 1192 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 SUSD6Q92537 303 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 GLG1Q92896 1179 aa13.06□□□□□ -0.32
CTNNA1-205ENST00000517904 GPRASP2Q96D09 838 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms