RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	EEF1G	P26641	437 aa	Known RBP	11.65	□□□□□ -0.54
CDK18-222	ENST00000515494	CIITA	P33076	1130 aa		11.65	□□□□□ -0.54
CDK18-222	ENST00000515494	HYI	Q5T013	277 aa		11.65	□□□□□ -0.54
CDK18-222	ENST00000515494	IL31RA	Q8NI17	732 aa		11.65	□□□□□ -0.54
CDK18-222	ENST00000515494	FAM212A	Q96EL1	285 aa		11.65	□□□□□ -0.54
CDK18-222	ENST00000515494	BHMT2	Q9H2M3	363 aa		11.65	□□□□□ -0.54
CDK18-222	ENST00000515494	MRPL44	Q9H9J2	332 aa	Known RBP	11.65	□□□□□ -0.54
CDK18-222	ENST00000515494	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.65	□□□□□ -0.54
CDK18-222	ENST00000515494	SFI1	A8K8P3	1242 aa		11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	RSPH10B2	B2RC85	870 aa		11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	RSPH10B	P0C881	870 aa		11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	EHHADH	Q08426	723 aa		11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	TBC1D8B	Q0IIM8	1120 aa		11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	ZNF507	Q8TCN5	953 aa		11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	NOC4L	Q9BVI4	516 aa	Known RBP	11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	LZTFL1	Q9NQ48	299 aa		11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	KCND1	Q9NSA2	647 aa		11.65	□□□□□ -0.55
CDK18-222	ENST00000515494	ICAM1	P05362	532 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	MYCL	P12524	364 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	KCNJ6	P48051	423 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	USP14	P54578	494 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	SLC12A3	P55017	1021 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	LRCH2	Q5VUJ6	765 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	HAUS3	Q68CZ6	603 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	SNRNP48	Q6IEG0	339 aa	Known RBP	11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	TPH2	Q8IWU9	490 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	PANX2	Q96RD6	677 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	CHP1	Q99653	195 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	VWA5A	O00534	786 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	ZBED4	O75132	1171 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	RPA1	P27694	616 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	CASP5	P51878	434 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	ERVK-24	P63145	666 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	MIIP	Q5JXC2	388 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	TRIM65	Q6PJ69	517 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	GUF1	Q8N442	669 aa	Known RBP	11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	CCDC155	Q8N6L0	562 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	ACRBP	Q8NEB7	543 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	FAM20A	Q96MK3	541 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	SLC38A10	Q9HBR0	1119 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	ABHD10	Q9NUJ1	306 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	AGPAT5	Q9NUQ2	364 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	DNM3	Q9UQ16	869 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	ABL1	P00519	1130 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	CYP3A4	P08684	503 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	CEP55	Q53EZ4	464 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	MYOCD	Q8IZQ8	938 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	TAAR1	Q96RJ0	339 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	PAGR1	Q9BTK6	254 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	RRP15	Q9Y3B9	282 aa	Known RBP	11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	AFG3L2	Q9Y4W6	797 aa		11.64	□□□□□ -0.55
CDK18-222	ENST00000515494	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	8e-8	■■□□□ 12.3
CDK18-222	ENST00000515494	TBX3	O15119	743 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	TPM1	P09493	284 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	ETF1	P62495	437 aa	Known RBP	11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	DNAJC21	Q5F1R6	531 aa	Known RBP	11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	CNGA4	Q8IV77	575 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	ERMN	Q8TAM6	284 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	CLEC4D	Q8WXI8	215 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	DYDC2	Q96IM9	177 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	WDR24	Q96S15	920 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	REEP2	Q9BRK0	252 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	RUSC1	Q9BVN2	902 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	RPS6	P62753	249 aa	Known RBP	11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	OTOP1	Q7RTM1	612 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	LRRN4CL	Q8ND94	238 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	RRAGC	Q9HB90	399 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	RNF146	Q9NTX7	359 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	ITIH6	Q6UXX5	1313 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	RASSF10	A6NK89	507 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	GAS7	O60861	476 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	TRIM21	P19474	475 aa	Known RBP	11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	MCTP2	Q6DN12	878 aa		11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK18-222	ENST00000515494	ZSCAN12	O43309	604 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	ITGB5	P18084	799 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	NF2	P35240	595 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	LMAN1	P49257	510 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	GNG11	P61952	73 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	BAAT	Q14032	418 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	TMEM132B	Q14DG7	1078 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	CCDC65	Q8IXS2	484 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	SCFD1	Q8WVM8	642 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	ZNF577	Q9BSK1	485 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	WDR11	Q9BZH6	1224 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	LRRC27	Q9C0I9	530 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	IKZF4	Q9H2S9	585 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	R3HDML	Q9H3Y0	253 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	PPP2R3B	Q9Y5P8	575 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	ADGRG1	Q9Y653	693 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	PSMD10	O75832	226 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	IREB2	P48200	963 aa	Known RBP	11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	GIT2	Q14161	759 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	COG2	Q14746	738 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	LRRC55	Q6ZSA7	311 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	SFR1	Q86XK3	245 aa		11.62	□□□□□ -0.55
CDK18-222	ENST00000515494	ZCCHC17	Q9NP64	241 aa	Known RBP	11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms