RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 LINC01553A4QN01 128 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 hCG_1984214I3L0E3 225 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 DDX39AO00148 427 aaKnown RBP18.55■□□□□ 0.56
SCLT1-204ENST00000503215 PRPF3O43395 683 aaKnown RBP18.55■□□□□ 0.56
SCLT1-204ENST00000503215 EFCAB14O75071 495 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 CAND2O75155 1236 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 INSRRP14616 1297 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 POU3F3P20264 500 aaPredicted RBP18.55■□□□□ 0.56
SCLT1-204ENST00000503215 PDIA3P30101 505 aaKnown RBP18.55■□□□□ 0.56
SCLT1-204ENST00000503215 AP3B2Q13367 1082 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 ZNF713Q8N859 430 aaPredicted RBP18.55■□□□□ 0.56
SCLT1-204ENST00000503215 RASGRP4Q8TDF6 673 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 DNAJB3Q8WWF6 145 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 CRYGNQ8WXF5 182 aa18.55■□□□□ 0.56
SCLT1-204ENST00000503215 KAT6AQ92794 2004 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 NFASCO94856 1347 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 NID2Q14112 1375 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 GHRP10912 638 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 ZNF76P36508 570 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 MGAT3Q09327 533 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 TOB2Q14106 344 aaPredicted RBP18.54■□□□□ 0.56
SCLT1-204ENST00000503215 PLCB4Q15147 1175 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 TJAP1Q5JTD0 557 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 GDPD5Q8WTR4 605 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 SDF4Q9BRK5 362 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 ZMYND12Q9H0C1 365 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 SUGCTQ9HAC7 445 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 THEGQ9P2T0 379 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 TUBE1Q9UJT0 475 aa18.54■□□□□ 0.56
SCLT1-204ENST00000503215 IGLV3-22A0A075B6J6 115 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 DHX15O43143 795 aaKnown RBP18.53■□□□□ 0.56
SCLT1-204ENST00000503215 EDIL3O43854 480 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 UPP2O95045 317 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 AMHP03971 560 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 PSMA5P28066 241 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 EVCP57679 992 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 TFF2Q03403 129 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 LPIN1Q14693 890 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 PLA2G4DQ86XP0 818 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 TEX2Q8IWB9 1127 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 ASB2Q96Q27 587 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 SLC26A6Q9BXS9 759 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 FAM49AQ9H0Q0 323 aaPredicted RBP18.53■□□□□ 0.56
SCLT1-204ENST00000503215 ZSWIM6Q9HCJ5 1215 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 MICAL3Q7RTP6 2002 aa18.53■□□□□ 0.56
SCLT1-204ENST00000503215 ESYT2A0FGR8 921 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 ATG7O95352 703 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 CYP3A4P08684 503 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 STAT5BP51692 787 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 ERVK-21P61565 698 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 HTRA4P83105 476 aaPredicted RBP18.52■□□□□ 0.55
SCLT1-204ENST00000503215 TAF2Q6P1X5 1199 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 RUFY3Q7L099 469 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 RPAINQ86UA6 219 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 ATXN2LQ8WWM7 1075 aaKnown RBP18.52■□□□□ 0.55
SCLT1-204ENST00000503215 C17orf80Q9BSJ5 609 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 IFIH1Q9BYX4 1025 aaKnown RBP18.52■□□□□ 0.55
SCLT1-204ENST00000503215 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.55
SCLT1-204ENST00000503215 GLT8D2Q9H1C3 349 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 VPS54Q9P1Q0 977 aa18.52■□□□□ 0.55
SCLT1-204ENST00000503215 GTPBP6O43824 516 aaPredicted RBP18.51■□□□□ 0.55
SCLT1-204ENST00000503215 TMEM62Q0P6H9 643 aa18.51■□□□□ 0.55
SCLT1-204ENST00000503215 SKIV2LQ15477 1246 aaKnown RBP18.51■□□□□ 0.55
SCLT1-204ENST00000503215 NIPA1Q7RTP0 329 aa18.51■□□□□ 0.55
SCLT1-204ENST00000503215 TOP1MTQ969P6 601 aa18.51■□□□□ 0.55
SCLT1-204ENST00000503215 TGS1Q96RS0 853 aaKnown RBP18.51■□□□□ 0.55
SCLT1-204ENST00000503215 AZI2Q9H6S1 392 aa18.51■□□□□ 0.55
SCLT1-204ENST00000503215 AGO3Q9H9G7 860 aaKnown RBP18.51■□□□□ 0.55
SCLT1-204ENST00000503215 C6orf50Q9HD87 102 aa18.51■□□□□ 0.55
SCLT1-204ENST00000503215 TRPC6Q9Y210 931 aa18.51■□□□□ 0.55
SCLT1-204ENST00000503215 INSL6Q9Y581 213 aa18.51■□□□□ 0.55
SCLT1-204ENST00000503215 CDY2AQ9Y6F7 541 aa18.51■□□□□ 0.55
SCLT1-204ENST00000503215 IGKV6D-21A0A0A0MT36 114 aa18.5■□□□□ 0.55
SCLT1-204ENST00000503215 DTNBO60941 627 aa18.5■□□□□ 0.55
SCLT1-204ENST00000503215 IFNAR1P17181 557 aa18.5■□□□□ 0.55
SCLT1-204ENST00000503215 MRPS5P82675 430 aaKnown RBP18.5■□□□□ 0.55
SCLT1-204ENST00000503215 ABHD15Q6UXT9 468 aa18.5■□□□□ 0.55
SCLT1-204ENST00000503215 PLPPR4Q7Z2D5 763 aa18.5■□□□□ 0.55
SCLT1-204ENST00000503215 REXO1Q8N1G1 1221 aaKnown RBP18.5■□□□□ 0.55
SCLT1-204ENST00000503215 SP7Q8TDD2 431 aaPredicted RBP18.5■□□□□ 0.55
SCLT1-204ENST00000503215 XIRP2A4UGR9 3374 aa18.49■□□□□ 0.55
SCLT1-204ENST00000503215 POTEB3A0JP26 581 aa18.49■□□□□ 0.55
SCLT1-204ENST00000503215 RRN3P2A6NIE6 340 aa18.49■□□□□ 0.55
SCLT1-204ENST00000503215 IPO5O00410 1097 aaKnown RBP18.49■□□□□ 0.55
SCLT1-204ENST00000503215 ATP4AP20648 1035 aa18.49■□□□□ 0.55
SCLT1-204ENST00000503215 MRPS6P82932 125 aaKnown RBP18.49■□□□□ 0.55
SCLT1-204ENST00000503215 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
SCLT1-204ENST00000503215 FBXO47Q5MNV8 452 aa18.49■□□□□ 0.55
SCLT1-204ENST00000503215 POTEBQ6S5H4 581 aa18.49■□□□□ 0.55
SCLT1-204ENST00000503215 CCDC60Q8IWA6 550 aaPredicted RBP18.49■□□□□ 0.55
SCLT1-204ENST00000503215 RNF26Q9BY78 433 aaPredicted RBP18.49■□□□□ 0.55
SCLT1-204ENST00000503215 SIP14410 1827 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 BACH1O14867 736 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 NEFLP07196 543 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 KCNQ1P51787 676 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 PRR16Q569H4 304 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 SWSAP1Q6NVH7 229 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 RSPH3Q86UC2 560 aa18.48■□□□□ 0.55
SCLT1-204ENST00000503215 SYMPKQ92797 1274 aaKnown RBP18.48■□□□□ 0.55
SCLT1-204ENST00000503215 LENG9Q96B70 501 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms