RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TTLL11Q8NHH1 800 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 EPS8L3Q8TE67 593 aaKnown RBP14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 ZMYND12Q9H0C1 365 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 FAM205AQ6ZU69 1335 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 FERP16591 822 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 COPS2P61201 443 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 ITIH4Q14624 930 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 NPY5RQ15761 445 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 FIGNQ5HY92 759 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 PPP1R15BQ5SWA1 713 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 CNBD1Q8NA66 436 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 MARCH10Q8NA82 808 aaPredicted RBP14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 ANKS1AQ92625 1134 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 RPS6KC1Q96S38 1066 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 TRIM9Q9C026 710 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 ABCC12Q96J65 1359 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 AFF2P51816 1311 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 SCG2P13521 617 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 FAM47AQ5JRC9 791 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 DZIP3Q86Y13 1208 aaKnown RBP14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 DNAJC10Q8IXB1 793 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 ZSCAN10Q96SZ4 725 aaPredicted RBP14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 NKX1-2Q9UD57 310 aaPredicted RBP14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 TRAF5O00463 557 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 FESP07332 822 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 FGFR4P22455 802 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 RFC5P40937 340 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 UBAP2Q5T6F2 1119 aaKnown RBP14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 RNF220Q5VTB9 566 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 HGSNATQ68CP4 663 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 KIAA0895Q8NCT3 520 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 PAIP2Q9BPZ3 127 aaKnown RBP14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 BCL9LQ86UU0 1499 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 FOXO6A8MYZ6 492 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 TLR2O60603 784 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 SUN1O94901 812 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 SLC29A2Q14542 456 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 LETM2Q2VYF4 491 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 SPATA5Q8NB90 893 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 NEK9Q8TD19 979 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 GLG1Q92896 1179 aa14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 USP15Q9Y4E8 981 aaPredicted RBP14.22□□□□□ -0.13
GAPVD1-220ENST00000497580 ASAP2O43150 1006 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 FGGP02679 453 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 SERPING1P05155 500 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 HNRNPH3P31942 346 aaKnown RBP14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 TECP42680 631 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 PDCD2Q16342 344 aaPredicted RBP14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 ASIC2Q16515 512 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 TXNRD1Q16881 649 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 EZH1Q92800 747 aaPredicted RBP14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 TNFRSF25Q93038 417 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 CNKSR1Q969H4 720 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 ITFG2Q969R8 447 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 UIMC1Q96RL1 719 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 TCRBV5S4A2TA0A5A2 114 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 CYP7A1P22680 504 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 CNNM4Q6P4Q7 775 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 ZSCAN29Q8IWY8 852 aaPredicted RBP14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 NELFCDQ8IXH7 590 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 BLIDQ8IZY5 108 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 GLIS3Q8NEA6 775 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 ATXN2LQ8WWM7 1075 aaKnown RBP14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 RAB17Q9H0T7 212 aa14.21□□□□□ -0.13
GAPVD1-220ENST00000497580 GOLGB1Q14789 3259 aaKnown RBP14.21□□□□□ -0.14
GAPVD1-220ENST00000497580 RTN3O95197 1032 aaPredicted RBP14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 GBP1P32455 592 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 PDE6CP51160 858 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 ZNF211Q13398 564 aaPredicted RBP14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 LLGL1Q15334 1064 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 ANO7Q6IWH7 933 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 PIGWQ7Z7B1 504 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.2□□□□□ -0.144e-8■■□□□ 12.8
GAPVD1-220ENST00000497580 CCDC169A6NNP5 214 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 SNX3O60493 162 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 PMS2P54278 862 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 RASGRF1Q13972 1273 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 MUM1Q2TAK8 710 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 VSIG1Q86XK7 387 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 TMEM237Q96Q45 408 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 EPAS1Q99814 870 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 SYT15Q9BQS2 421 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 MYH7BA7E2Y1 1941 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 SSU72P8A0A1W2PR75 194 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 LCA5LO95447 670 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 ROR2Q01974 943 aaKnown RBP14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 ZNF449Q6P9G9 518 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 TMTC3Q6ZXV5 915 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 HEATR3Q7Z4Q2 680 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 MFN1Q8IWA4 741 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 CDK5RAP3Q96JB5 506 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 ZHX3Q9H4I2 956 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 KBTBD4Q9NVX7 518 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 NR2E1Q9Y466 385 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 ATP6V0A2Q9Y487 856 aa14.2□□□□□ -0.14
GAPVD1-220ENST00000497580 ALX1Q15699 326 aa14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 SLC18A3Q16572 532 aa14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 ASTE1Q2TB18 679 aaPredicted RBP14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 ASAP1Q9ULH1 1129 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms