RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 CRYGNQ8WXF5 182 aa22.05■■□□□ 1.12
CD55-209ENST00000488171 PHKBQ93100 1093 aa22.05■■□□□ 1.12
CD55-209ENST00000488171 SDF4Q9BRK5 362 aa22.05■■□□□ 1.12
CD55-209ENST00000488171 ZMYND12Q9H0C1 365 aa22.05■■□□□ 1.12
CD55-209ENST00000488171 TUBE1Q9UJT0 475 aa22.05■■□□□ 1.12
CD55-209ENST00000488171 LINC01553A4QN01 128 aa22.04■■□□□ 1.12
CD55-209ENST00000488171 EPB41L2O43491 1005 aaKnown RBP22.04■■□□□ 1.12
CD55-209ENST00000488171 LPXNO60711 386 aa22.04■■□□□ 1.12
CD55-209ENST00000488171 AMHP03971 560 aa22.04■■□□□ 1.12
CD55-209ENST00000488171 EVCP57679 992 aa22.04■■□□□ 1.12
CD55-209ENST00000488171 GRB10Q13322 594 aa22.04■■□□□ 1.12
CD55-209ENST00000488171 NIPA1Q7RTP0 329 aa22.04■■□□□ 1.12
CD55-209ENST00000488171 MYOCDQ8IZQ8 938 aa22.04■■□□□ 1.12
CD55-209ENST00000488171 CUL9Q8IWT3 2517 aa22.04■■□□□ 1.12
CD55-209ENST00000488171 SPTBN5Q9NRC6 3674 aaKnown RBP22.04■■□□□ 1.12
CD55-209ENST00000488171 FAM86B1E9PN63 330 aa22.03■■□□□ 1.12
CD55-209ENST00000488171 GTPBP6O43824 516 aaPredicted RBP22.03■■□□□ 1.12
CD55-209ENST00000488171 FAM86B2P0C5J1 330 aa22.03■■□□□ 1.12
CD55-209ENST00000488171 MGAT3Q09327 533 aa22.03■■□□□ 1.12
CD55-209ENST00000488171 SYMPKQ92797 1274 aaKnown RBP22.03■■□□□ 1.12
CD55-209ENST00000488171 IGLV3-22A0A075B6J6 115 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.02■■□□□ 1.12
CD55-209ENST00000488171 PPFIA3O75145 1194 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 ATG7O95352 703 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 CYP3A4P08684 503 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 INSRRP14616 1297 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 PDIA3P30101 505 aaKnown RBP22.02■■□□□ 1.12
CD55-209ENST00000488171 ZNF76P36508 570 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 ERVK-21P61565 698 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 HTRA4P83105 476 aaPredicted RBP22.02■■□□□ 1.12
CD55-209ENST00000488171 RUFY3Q7L099 469 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 CCDC12Q8WUD4 166 aaPredicted RBP22.02■■□□□ 1.12
CD55-209ENST00000488171 DNAJB3Q8WWF6 145 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 APBB2Q92870 758 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 ZBTB10Q96DT7 871 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 IFIH1Q9BYX4 1025 aaKnown RBP22.02■■□□□ 1.12
CD55-209ENST00000488171 AZI2Q9H6S1 392 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 ZSWIM6Q9HCJ5 1215 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 C6orf50Q9HD87 102 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 INSL6Q9Y581 213 aa22.02■■□□□ 1.12
CD55-209ENST00000488171 CCNE2O96020 404 aa22.01■■□□□ 1.11
CD55-209ENST00000488171 IGBP1P78318 339 aa22.01■■□□□ 1.11
CD55-209ENST00000488171 TOB2Q14106 344 aaPredicted RBP22.01■■□□□ 1.11
CD55-209ENST00000488171 PLCB4Q15147 1175 aa22.01■■□□□ 1.11
CD55-209ENST00000488171 PLPPR4Q7Z2D5 763 aa22.01■■□□□ 1.11
CD55-209ENST00000488171 PLA2G4DQ86XP0 818 aa22.01■■□□□ 1.11
CD55-209ENST00000488171 ASB2Q96Q27 587 aa22.01■■□□□ 1.11
CD55-209ENST00000488171 TGS1Q96RS0 853 aaKnown RBP22.01■■□□□ 1.11
CD55-209ENST00000488171 RNF26Q9BY78 433 aaPredicted RBP22.01■■□□□ 1.11
CD55-209ENST00000488171 NCOA5Q9HCD5 579 aaKnown RBP22.01■■□□□ 1.11
CD55-209ENST00000488171 MTUS1Q9ULD2 1270 aa22.01■■□□□ 1.11
CD55-209ENST00000488171 IGKV6D-21A0A0A0MT36 114 aa22■■□□□ 1.11
CD55-209ENST00000488171 RRN3P2A6NIE6 340 aa22■■□□□ 1.11
CD55-209ENST00000488171 DDX39AO00148 427 aaKnown RBP22■■□□□ 1.11
CD55-209ENST00000488171 DHX15O43143 795 aaKnown RBP22■■□□□ 1.11
CD55-209ENST00000488171 GHRP10912 638 aa22■■□□□ 1.11
CD55-209ENST00000488171 IFNAR1P17181 557 aa22■■□□□ 1.11
CD55-209ENST00000488171 STAT5BP51692 787 aa22■■□□□ 1.11
CD55-209ENST00000488171 CCT2P78371 535 aaKnown RBP22■■□□□ 1.11
CD55-209ENST00000488171 MRPS5P82675 430 aaKnown RBP22■■□□□ 1.11
CD55-209ENST00000488171 MAPK8IP2Q13387 824 aaPredicted RBP22■■□□□ 1.11
CD55-209ENST00000488171 LPIN1Q14693 890 aa22■■□□□ 1.11
CD55-209ENST00000488171 RSPH3Q86UC2 560 aa22■■□□□ 1.11
CD55-209ENST00000488171 REXO1Q8N1G1 1221 aaKnown RBP22■■□□□ 1.11
CD55-209ENST00000488171 SP7Q8TDD2 431 aaPredicted RBP22■■□□□ 1.11
CD55-209ENST00000488171 GDPD5Q8WTR4 605 aa22■■□□□ 1.11
CD55-209ENST00000488171 TOP1MTQ969P6 601 aa22■■□□□ 1.11
CD55-209ENST00000488171 SUGCTQ9HAC7 445 aa22■■□□□ 1.11
CD55-209ENST00000488171 TRPC6Q9Y210 931 aa22■■□□□ 1.11
CD55-209ENST00000488171 PRRC2BQ5JSZ5 2229 aaKnown RBP22■■□□□ 1.11
CD55-209ENST00000488171 MCTP2Q6DN12 878 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 ABHD15Q6UXT9 468 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 TRAPPC12Q8WVT3 735 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 SLC26A6Q9BXS9 759 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 TSPYL2Q9H2G4 693 aaPredicted RBP21.99■■□□□ 1.11
CD55-209ENST00000488171 NEFLP07196 543 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 GNA11P29992 359 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 AKAP17AQ02040 695 aaKnown RBP21.99■■□□□ 1.11
CD55-209ENST00000488171 RASGRP4Q8TDF6 673 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 UIMC1Q96RL1 719 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 C17orf80Q9BSJ5 609 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 CDY2AQ9Y6F7 541 aa21.99■■□□□ 1.11
CD55-209ENST00000488171 COL4A6Q14031 1691 aa21.98■■□□□ 1.11
CD55-209ENST00000488171 POTEB3A0JP26 581 aa21.98■■□□□ 1.11
CD55-209ENST00000488171 IPO5O00410 1097 aaKnown RBP21.98■■□□□ 1.11
CD55-209ENST00000488171 UPP2O95045 317 aa21.98■■□□□ 1.11
CD55-209ENST00000488171 MRPS6P82932 125 aaKnown RBP21.98■■□□□ 1.11
CD55-209ENST00000488171 FBXO47Q5MNV8 452 aa21.98■■□□□ 1.11
CD55-209ENST00000488171 POTEBQ6S5H4 581 aa21.98■■□□□ 1.11
CD55-209ENST00000488171 TNPO1Q92973 898 aaKnown RBP21.98■■□□□ 1.11
CD55-209ENST00000488171 TM6SF1Q9BZW5 370 aa21.98■■□□□ 1.11
CD55-209ENST00000488171 FAM49AQ9H0Q0 323 aaPredicted RBP21.98■■□□□ 1.11
CD55-209ENST00000488171 VPS54Q9P1Q0 977 aa21.98■■□□□ 1.11
CD55-209ENST00000488171 PCDHA2Q9Y5H9 948 aa21.98■■□□□ 1.11
CD55-209ENST00000488171 CYP46A1Q9Y6A2 500 aa21.98■■□□□ 1.11
CD55-209ENST00000488171 XIRP2A4UGR9 3374 aa21.97■■□□□ 1.11
CD55-209ENST00000488171 SLC26A2P50443 739 aa21.97■■□□□ 1.11
CD55-209ENST00000488171 SETQ01105 290 aaPredicted RBP21.97■■□□□ 1.11
CD55-209ENST00000488171 TFF2Q03403 129 aa21.97■■□□□ 1.11
CD55-209ENST00000488171 SKIV2LQ15477 1246 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms