RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 TAP1Q03518 808 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 E2F4Q16254 413 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 FAM160B2Q86V87 743 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CYTH2Q99418 400 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 TIPINQ9BVW5 301 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 WNT8AQ9H1J5 351 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 KIAA1024Q9UPX6 916 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 PLAAQ9Y263 795 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 SASH1O94885 1247 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 KRT7P08729 469 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 BRAFP15056 766 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 PABPC4Q13310 644 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 KRT81Q14533 505 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 MMEL1Q495T6 779 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 NSMFQ6X4W1 530 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 ZNF354CQ86Y25 554 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 PYROXD1Q8WU10 500 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 MAP3K14Q99558 947 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 ETNK1Q9HBU6 452 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 SERPINB13Q9UIV8 391 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 GGA2Q9UJY4 613 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 SATB2Q9UPW6 733 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CDHR2Q9BYE9 1310 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 SOWAHDA6NJG2 315 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 VGLL3A8MV65 326 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 NOP56O00567 594 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 PDXKO00764 312 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 P4HA2O15460 535 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CHEK2O96017 543 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CYP2J2P51589 502 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 AP2B1P63010 937 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 PRPSAP1Q14558 356 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 JADE1Q6IE81 842 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 C4orf22Q6V702 233 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 MB21D2Q8IYB1 491 aaPredicted RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 KCNK16Q96T55 309 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CYP26B1Q9NR63 512 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 NCOA3Q9Y6Q9 1424 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 A0A1W2PQJ5 194 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 K7ENM7 598 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CPP00450 1065 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 MX2P20592 715 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 SMARCA1P28370 1054 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 IRAK1P51617 712 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CCZ1BP86790 482 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 CCZ1P86791 482 aaPredicted RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 EP400NLQ6ZTU2 488 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 KCNB2Q92953 911 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 PPWD1Q96BP3 646 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 ELAC2Q9BQ52 826 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 SNX25Q9H3E2 840 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 SLC5A4Q9NY91 659 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 ADD3Q9UEY8 706 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 L1RE1Q9UN81 338 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 A2ML1A8K2U0 1454 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 A6NJR5 290 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 TMEM232C9JQI7 657 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 H7C0C1 242 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 HNRNPDLO14979 420 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 HNRNPRO43390 633 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 SERPINB2P05120 415 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 KRT10P13645 584 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 DDIT3P35638 169 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 ATP5OP48047 213 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 HDAC4P56524 1084 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 XKR9Q5GH70 373 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 OSBP2Q969R2 916 aa6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 EDC3Q96F86 508 aaKnown RBP6.61□□□□□ -1.35
PRPF4B-205ENST00000480058 PNPLA7Q6ZV29 1317 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TTC26A0AVF1 554 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ITIH2P19823 946 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 NFKBIAP25963 317 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ARFIP2P53365 341 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 POLE2P56282 527 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 SNRPFP62306 86 aaKnown RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 NOP14P78316 857 aaKnown RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ICA1Q05084 483 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TRADDQ15628 312 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 MFSD14BQ5SR56 506 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 POTEAQ6S8J7 498 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 PRUNE1Q86TP1 453 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 XXYLT1Q8NBI6 393 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 RNF34Q969K3 372 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 CCDC127Q96BQ5 260 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 CCT8L2Q96SF2 557 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 KLC2Q9H0B6 622 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 SUN2Q9UH99 717 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 PAIP2BQ9ULR5 123 aaKnown RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 WDR17Q8IZU2 1322 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 COPEO14579 308 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 PPARGP37231 505 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 AP1B1Q10567 949 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 PPP2R5DQ14738 602 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ERGIC2Q96RQ1 377 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 NUDCD1Q96RS6 583 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 CXorf56Q9H5V9 222 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 BLOC1S6Q9UL45 172 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 PLAGL2Q9UPG8 496 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 IVNS1ABPQ9Y6Y0 642 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms