RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 GCKP35557 465 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 TOB1P50616 345 aaPredicted RBP15.58■□□□□ 0.08
COL20A1-206ENST00000479501 C10orf76Q5T2E6 689 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 TAOK1Q7L7X3 1001 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 ADGRA1Q86SQ6 560 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 TSNARE1Q96NA8 513 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 ZMYND12Q9H0C1 365 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 NRBP2Q9NSY0 501 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 LRRC53A6NM62 1247 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 HEXIM1O94992 359 aaKnown RBP15.58■□□□□ 0.08
COL20A1-206ENST00000479501 C2orf54Q08AI8 447 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 MESDQ14696 234 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 DENND2CQ68D51 928 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 TXNRD3Q86VQ6 643 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 NCAPG2Q86XI2 1143 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 SREK1Q8WXA9 508 aaKnown RBP15.58■□□□□ 0.08
COL20A1-206ENST00000479501 CDHR1Q96JP9 859 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 TACO1Q9BSH4 297 aaKnown RBP15.58■□□□□ 0.08
COL20A1-206ENST00000479501 SPATA31A6Q5VVP1 1343 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 GBP1P32455 592 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 SLC7A3Q8WY07 619 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 EPB41L5Q9HCM4 733 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 CEP72Q9P209 647 aa15.58■□□□□ 0.08
COL20A1-206ENST00000479501 RHOBTB3O94955 611 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 MXI1P50539 228 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 PTK2Q05397 1052 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 KCNH2Q12809 1159 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 SULF1Q8IWU6 871 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 METTL13Q8N6R0 699 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 WDR24Q96S15 920 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 C3P01024 1663 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 STAT3P40763 770 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 GADL1Q6ZQY3 521 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 EFCAB13Q8IY85 973 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 TRPC6Q9Y210 931 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 GKAP1Q5VSY0 366 aaPredicted RBP15.57■□□□□ 0.08
COL20A1-206ENST00000479501 HPS3Q969F9 1004 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 SLC4A9Q96Q91 983 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 ABCB6Q9NP58 842 aa15.57■□□□□ 0.08
COL20A1-206ENST00000479501 PGRMC1O00264 195 aaKnown RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 EPHB4P54760 987 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 STRIP1Q5VSL9 837 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 CDC42EP5Q6NZY7 148 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 VGLL2Q8N8G2 317 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 TC2NQ8N9U0 490 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 ARHGEF2Q92974 986 aaKnown RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 ANKFY1Q9P2R3 1169 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 AP5Z1O43299 807 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 NR3C1P04150 777 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 BPIFB4P59827 614 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 STK4Q13043 487 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 PPP2R5AQ15172 486 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 KNOP1Q1ED39 458 aaKnown RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 HHIPL2Q6UWX4 724 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 ARHGAP27Q6ZUM4 889 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 IRX2Q9BZI1 471 aaPredicted RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 UBE2TQ9NPD8 197 aaPredicted RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 HERC5Q9UII4 1024 aaKnown RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 CAPN11Q9UMQ6 739 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 MON2Q7Z3U7 1717 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 A0A087WUV0 522 aaPredicted RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 NSFP46459 744 aaKnown RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 FXR1P51114 621 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 NAALADL2Q58DX5 795 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 TRIM6Q9C030 488 aaPredicted RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 PRELPP51888 382 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 YWHAEP62258 255 aaKnown RBP15.56■□□□□ 0.08
COL20A1-206ENST00000479501 C7orf25Q9BPX7 421 aa15.56■□□□□ 0.08
COL20A1-206ENST00000479501 ANO9A1A5B4 782 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 SUPT20HL1Q3ZLR7 823 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 BRDTQ58F21 947 aaPredicted RBP15.55■□□□□ 0.08
COL20A1-206ENST00000479501 MCUR1Q96AQ8 359 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 MYO1FO00160 1098 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 RNF40O75150 1001 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 SMARCA1P28370 1054 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 SLC8A3P57103 927 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 ALCAMQ13740 583 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 CASP8Q14790 479 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 E2F4Q16254 413 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 DALRD3Q5D0E6 543 aaKnown RBP15.55■□□□□ 0.08
COL20A1-206ENST00000479501 TTC19Q6DKK2 380 aaPredicted RBP15.55■□□□□ 0.08
COL20A1-206ENST00000479501 SRGAP2O75044 1071 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 KCTD16Q68DU8 428 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 C3orf67Q6ZVT6 689 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 ZNF526Q8TF50 670 aaPredicted RBP15.55■□□□□ 0.08
COL20A1-206ENST00000479501 MAGOHBQ96A72 148 aaKnown RBP15.55■□□□□ 0.08
COL20A1-206ENST00000479501 MRRFQ96E11 262 aaKnown RBP15.55■□□□□ 0.08
COL20A1-206ENST00000479501 CHP1Q99653 195 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 VCXQ9H320 206 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 PLCB1Q9NQ66 1216 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 EIF3CLB5ME19 914 aaKnown RBP15.55■□□□□ 0.08
COL20A1-206ENST00000479501 VPS41P49754 854 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 ZNF131P52739 623 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 APBA1Q02410 837 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 FYB2Q5VWT5 728 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 DYDC2Q96IM9 177 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 EIF3CQ99613 913 aaKnown RBP15.55■□□□□ 0.08
COL20A1-206ENST00000479501 EFCC1Q9HA90 598 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 MAD2L2Q9UI95 211 aa15.55■□□□□ 0.08
COL20A1-206ENST00000479501 FEM1BQ9UK73 627 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms