RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 RRN3P2A6NIE6 340 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 hCG_1984214I3L0E3 225 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 ZBTB43O43298 467 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 FOSP01100 380 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-236ENST00000477477 RPLP2P05387 115 aaKnown RBP12.99□□□□□ -0.33
HDLBP-236ENST00000477477 ADCY7P51828 1080 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 IGBP1P78318 339 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 GPM6BQ13491 265 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 ADCK5Q3MIX3 580 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 LEXMQ3ZCV2 418 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 FBXO47Q5MNV8 452 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 TSHZ1Q6ZSZ6 1077 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-236ENST00000477477 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 ZNF713Q8N859 430 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-236ENST00000477477 CYP2W1Q8TAV3 490 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 IL17RAQ96F46 866 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 PGBD1Q96JS3 809 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 SDF4Q9BRK5 362 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 C1QTNF1Q9BXJ1 281 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 ANO3Q9BYT9 981 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 AZI2Q9H6S1 392 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 BARHL2Q9NY43 387 aa12.99□□□□□ -0.33
HDLBP-236ENST00000477477 ADGRA3Q8IWK6 1321 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 GOLGA8BA8MQT2 603 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 STXBP3O00186 592 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 LINC00271P0C7V0 271 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 ARP10275 920 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 INSRRP14616 1297 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 KCNA5P22460 613 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 SREBF1P36956 1147 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 RCAN1P53805 252 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 ACTR2P61160 394 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 MRPS6P82932 125 aaKnown RBP12.98□□□□□ -0.33
HDLBP-236ENST00000477477 AP3B2Q13367 1082 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 CEP55Q53EZ4 464 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 FIBCD1Q8N539 461 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 BANK1Q8NDB2 785 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
HDLBP-236ENST00000477477 ZBTB10Q96DT7 871 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 RC3H2Q9HBD1 1191 aaKnown RBP12.98□□□□□ -0.33
HDLBP-236ENST00000477477 AGO4Q9HCK5 861 aaKnown RBP12.98□□□□□ -0.33
HDLBP-236ENST00000477477 FAM217BQ9NTX9 383 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-236ENST00000477477 RAPGEFL1Q9UHV5 662 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 TRPC6Q9Y210 931 aa12.98□□□□□ -0.33
HDLBP-236ENST00000477477 V9GY48 417 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-236ENST00000477477 KLF18A0A0U1RQI7 1052 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 SMCO2A6NFE2 343 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 C5orf67F2Z3F1 127 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 MEIS1O00470 390 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 ENPP3O14638 875 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 CDC27P30260 824 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 CTNNB1P35222 781 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 CLK2P49760 499 aaKnown RBP12.97□□□□□ -0.33
HDLBP-236ENST00000477477 ITGB3BPQ13352 177 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-236ENST00000477477 KRT32Q14532 448 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 PLCB4Q15147 1175 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 TCEAL5Q5H9L2 206 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 IER5Q5VY09 327 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 PLPPR4Q7Z2D5 763 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-236ENST00000477477 LINC01599Q8WXQ3 324 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 FAM49AQ9H0Q0 323 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-236ENST00000477477 GLT8D2Q9H1C3 349 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 EPHX3Q9H6B9 360 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
HDLBP-236ENST00000477477 TMEM260Q9NX78 707 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 TRPV2Q9Y5S1 764 aa12.97□□□□□ -0.33
HDLBP-236ENST00000477477 CDC45O75419 566 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 ATG7O95352 703 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 RB1P06400 928 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
HDLBP-236ENST00000477477 CD52P31358 61 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 STAT5BP51692 787 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 COL19A1Q14993 1142 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 NIPA1Q7RTP0 329 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 NEK9Q8TD19 979 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 TRAPPC12Q8WVT3 735 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.331e-15■■■■□ 26.7
HDLBP-236ENST00000477477 CLP1Q92989 425 aaKnown RBP12.96□□□□□ -0.33
HDLBP-236ENST00000477477 ZNF689Q96CS4 500 aaPredicted RBP12.96□□□□□ -0.33
HDLBP-236ENST00000477477 NSUN3Q9H649 340 aaKnown RBP12.96□□□□□ -0.33
HDLBP-236ENST00000477477 RWDD3Q9Y3V2 267 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 PCDHA2Q9Y5H9 948 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 SQORQ9Y6N5 450 aa12.96□□□□□ -0.33
HDLBP-236ENST00000477477 IGKV6D-21A0A0A0MT36 114 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 SMIM35A0A1B0GVV1 85 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 POTEB3A0JP26 581 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 M0QZ92 97 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 DGKIO75912 1065 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 CCNE2O96020 404 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 IL9P15248 144 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 BMPR1AP36894 532 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 SLC26A2P50443 739 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 PFKFB3Q16875 520 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-236ENST00000477477 PTCRAQ6ISU1 281 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-236ENST00000477477 POTEBQ6S5H4 581 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 FAM178BQ8IXR5 827 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 PABPC5Q96DU9 382 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms