RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 RNMTO43148 476 aaKnown RBP15.04■□□□□ -0
HDAC1-206ENST00000476391 PTDSS1P48651 473 aaKnown RBP15.04■□□□□ -0
HDAC1-206ENST00000476391 RPS6KA1Q15418 735 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 ENOX2Q16206 610 aaKnown RBP15.04■□□□□ -0
HDAC1-206ENST00000476391 C6orf118Q5T5N4 469 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 RRAGAQ7L523 313 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 NCSTNQ92542 709 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 P2RX5Q93086 422 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 FMO2Q99518 471 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 RNF26Q9BY78 433 aaPredicted RBP15.04■□□□□ -0
HDAC1-206ENST00000476391 TXLNGQ9NUQ3 528 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 PNMA3Q9UL41 463 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 RPL26L1Q9UNX3 145 aaKnown RBP15.04■□□□□ -0
HDAC1-206ENST00000476391 MROH7Q68CQ1 1323 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 KCNK3O14649 394 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 GSTT1P30711 240 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 SETDB1Q15047 1291 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 ZNF174Q15697 407 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 EARS2Q5JPH6 523 aaKnown RBP15.04■□□□□ -0
HDAC1-206ENST00000476391 LONP2Q86WA8 852 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 AGGF1Q8N302 714 aaeCLIP15.04■□□□□ -03e-8■■■□□ 15.2
HDAC1-206ENST00000476391 XAGE3Q8WTP9 111 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 UTP4Q969X6 686 aaKnown RBP15.04■□□□□ -0
HDAC1-206ENST00000476391 PHF20Q9BVI0 1012 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 PABPC3Q9H361 631 aaKnown RBP15.04■□□□□ -0
HDAC1-206ENST00000476391 ETNK1Q9HBU6 452 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 ZSWIM5Q9P217 1185 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 ZNF510Q9Y2H8 683 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 ATP8A1Q9Y2Q0 1164 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 UTP11Q9Y3A2 253 aaKnown RBP15.04■□□□□ -0
HDAC1-206ENST00000476391 PNPLA7Q6ZV29 1317 aa15.04■□□□□ -0
HDAC1-206ENST00000476391 PXDNQ92626 1479 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 PGRMC1O00264 195 aaKnown RBP15.03■□□□□ -0
HDAC1-206ENST00000476391 EPHB6O15197 1021 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 KLRC4O43908 158 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 LMNAP02545 664 aaKnown RBP15.03■□□□□ -0
HDAC1-206ENST00000476391 KLRC1P26715 233 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 CASP7P55210 303 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 MUM1Q2TAK8 710 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 ZNF530Q6P9A1 599 aaPredicted RBP15.03■□□□□ -0
HDAC1-206ENST00000476391 ANKRD13DQ6ZTN6 518 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 BAP1Q92560 729 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 FAM163AQ96GL9 167 aaPredicted RBP15.03■□□□□ -0
HDAC1-206ENST00000476391 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.03■□□□□ -06e-7■■■■□ 19.3
HDAC1-206ENST00000476391 FAM207AQ9NSI2 230 aaPredicted RBP15.03■□□□□ -0
HDAC1-206ENST00000476391 PDP2Q9P2J9 529 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 PRKAG3Q9UGI9 489 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 PACSIN2Q9UNF0 486 aaPredicted RBP15.03■□□□□ -0
HDAC1-206ENST00000476391 A0A087WZG4 1122 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 ATP6V1G1O75348 118 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 DESP17661 470 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 ALDH1B1P30837 517 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 CNGA2Q16280 664 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 SLC9C1Q4G0N8 1177 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 VWA3BQ502W6 1294 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 WASHC2DQ5SRD0 308 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 HGSNATQ68CP4 663 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 RNF43Q68DV7 783 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 PDXDC1Q6P996 788 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 COPS6Q7L5N1 327 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 TAOK1Q7L7X3 1001 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 PHC3Q8NDX5 983 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 NEK9Q8TD19 979 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 ANKS1AQ92625 1134 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 TMEM237Q96Q45 408 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 NUDCD1Q96RS6 583 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.03■□□□□ -04e-6■■■■□ 20.1
HDAC1-206ENST00000476391 LRMDAQ9H2I8 198 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 TRIM33Q9UPN9 1127 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 CHD4Q14839 1912 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 ROBO2Q9HCK4 1378 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 ATRNO75882 1429 aa15.03■□□□□ -0
HDAC1-206ENST00000476391 EYA2O00167 538 aa15.02■□□□□ -0
HDAC1-206ENST00000476391 WNT7AO00755 349 aa15.02■□□□□ -0
HDAC1-206ENST00000476391 ITGA6P23229 1130 aa15.02■□□□□ -0
HDAC1-206ENST00000476391 LONP1P36776 959 aaKnown RBP15.02■□□□□ -0
HDAC1-206ENST00000476391 USP11P51784 963 aa15.02■□□□□ -0
HDAC1-206ENST00000476391 ZNF333Q96JL9 665 aa15.02■□□□□ -0
HDAC1-206ENST00000476391 DDX47Q9H0S4 455 aaKnown RBP15.02■□□□□ -0
HDAC1-206ENST00000476391 CNNM2Q9H8M5 875 aa15.02■□□□□ -0
HDAC1-206ENST00000476391 PREBQ9HCU5 417 aa15.02■□□□□ -0
HDAC1-206ENST00000476391 SLIT3O75094 1523 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 CIAO1O76071 339 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 SKIP12755 728 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 IFNAR2P48551 515 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 NLRP6P59044 892 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 DENND2CQ68D51 928 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 BTNL9Q6UXG8 535 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 TMC4Q7Z404 712 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 TMTC2Q8N394 836 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 CCDC82Q8N4S0 544 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 ATP8B4Q8TF62 1192 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 SYN2Q92777 582 aaPredicted RBP15.02□□□□□ -0.01
HDAC1-206ENST00000476391 MKL1Q969V6 931 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 TMEM109Q9BVC6 243 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 ZMYND12Q9H0C1 365 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 EPB41L4BQ9H329 900 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 MMRN2Q9H8L6 949 aa15.02□□□□□ -0.01
HDAC1-206ENST00000476391 FGFR1OP2Q9NVK5 253 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms