RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 FOSP01100 380 aaPredicted RBP28.34■■■□□ 2.13
PKD1-211ENST00000474088 INSRRP14616 1297 aa28.34■■■□□ 2.13
PKD1-211ENST00000474088 IGBP1P78318 339 aa28.34■■■□□ 2.13
PKD1-211ENST00000474088 RTN1Q16799 776 aa28.34■■■□□ 2.13
PKD1-211ENST00000474088 PPP1R18Q6NYC8 613 aa28.34■■■□□ 2.13
PKD1-211ENST00000474088 RASEFQ8IZ41 740 aa28.34■■■□□ 2.13
PKD1-211ENST00000474088 PGBD1Q96JS3 809 aa28.34■■■□□ 2.13
PKD1-211ENST00000474088 AZI2Q9H6S1 392 aa28.34■■■□□ 2.13
PKD1-211ENST00000474088 CDY2AQ9Y6F7 541 aa28.34■■■□□ 2.13
PKD1-211ENST00000474088 ENPP3O14638 875 aa28.33■■■□□ 2.13
PKD1-211ENST00000474088 ARP10275 920 aa28.33■■■□□ 2.13
PKD1-211ENST00000474088 ADCK5Q3MIX3 580 aa28.33■■■□□ 2.13
PKD1-211ENST00000474088 LEXMQ3ZCV2 418 aa28.33■■■□□ 2.13
PKD1-211ENST00000474088 FBXO47Q5MNV8 452 aa28.33■■■□□ 2.13
PKD1-211ENST00000474088 FIBCD1Q8N539 461 aa28.33■■■□□ 2.13
PKD1-211ENST00000474088 TNPO1Q92973 898 aaKnown RBP28.33■■■□□ 2.13
PKD1-211ENST00000474088 NFASCO94856 1347 aa28.33■■■□□ 2.13
PKD1-211ENST00000474088 SMCO2A6NFE2 343 aa28.32■■■□□ 2.12
PKD1-211ENST00000474088 RPLP2P05387 115 aaKnown RBP28.32■■■□□ 2.12
PKD1-211ENST00000474088 ADCY7P51828 1080 aa28.32■■■□□ 2.12
PKD1-211ENST00000474088 CEP55Q53EZ4 464 aa28.32■■■□□ 2.12
PKD1-211ENST00000474088 ZBTB10Q96DT7 871 aa28.32■■■□□ 2.12
PKD1-211ENST00000474088 SDF4Q9BRK5 362 aa28.32■■■□□ 2.12
PKD1-211ENST00000474088 ANO3Q9BYT9 981 aa28.32■■■□□ 2.12
PKD1-211ENST00000474088 EPHX3Q9H6B9 360 aa28.32■■■□□ 2.12
PKD1-211ENST00000474088 RAPGEFL1Q9UHV5 662 aa28.32■■■□□ 2.12
PKD1-211ENST00000474088 hCG_1984214I3L0E3 225 aa28.31■■■□□ 2.12
PKD1-211ENST00000474088 STXBP3O00186 592 aa28.31■■■□□ 2.12
PKD1-211ENST00000474088 KCNA5P22460 613 aa28.31■■■□□ 2.12
PKD1-211ENST00000474088 ACTR2P61160 394 aa28.31■■■□□ 2.12
PKD1-211ENST00000474088 MRPS6P82932 125 aaKnown RBP28.31■■■□□ 2.12
PKD1-211ENST00000474088 TIGD5Q53EQ6 642 aa28.31■■■□□ 2.12
PKD1-211ENST00000474088 CENPQQ7L2Z9 268 aaPredicted RBP28.31■■■□□ 2.12
PKD1-211ENST00000474088 PLPPR4Q7Z2D5 763 aa28.31■■■□□ 2.12
PKD1-211ENST00000474088 ZNF713Q8N859 430 aaPredicted RBP28.31■■■□□ 2.12
PKD1-211ENST00000474088 BANK1Q8NDB2 785 aa28.31■■■□□ 2.12
PKD1-211ENST00000474088 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.31■■■□□ 2.12
PKD1-211ENST00000474088 FAM217BQ9NTX9 383 aaPredicted RBP28.31■■■□□ 2.12
PKD1-211ENST00000474088 BARHL2Q9NY43 387 aa28.31■■■□□ 2.12
PKD1-211ENST00000474088 STAT5BP51692 787 aa28.3■■■□□ 2.12
PKD1-211ENST00000474088 PLCB4Q15147 1175 aa28.3■■■□□ 2.12
PKD1-211ENST00000474088 IER5Q5VY09 327 aa28.3■■■□□ 2.12
PKD1-211ENST00000474088 TSHZ1Q6ZSZ6 1077 aa28.3■■■□□ 2.12
PKD1-211ENST00000474088 FAM49AQ9H0Q0 323 aaPredicted RBP28.3■■■□□ 2.12
PKD1-211ENST00000474088 AGO3Q9H9G7 860 aaKnown RBP28.3■■■□□ 2.12
PKD1-211ENST00000474088 AGO4Q9HCK5 861 aaKnown RBP28.3■■■□□ 2.12
PKD1-211ENST00000474088 TMEM260Q9NX78 707 aa28.3■■■□□ 2.12
PKD1-211ENST00000474088 TRPC6Q9Y210 931 aa28.3■■■□□ 2.12
PKD1-211ENST00000474088 KLF18A0A0U1RQI7 1052 aa28.29■■■□□ 2.12
PKD1-211ENST00000474088 GOLGA8AA7E2F4 631 aa28.29■■■□□ 2.12
PKD1-211ENST00000474088 GOLGA8BA8MQT2 603 aa28.29■■■□□ 2.12
PKD1-211ENST00000474088 MEIS1O00470 390 aa28.29■■■□□ 2.12
PKD1-211ENST00000474088 ATG7O95352 703 aa28.29■■■□□ 2.12
PKD1-211ENST00000474088 ITGB3BPQ13352 177 aaPredicted RBP28.29■■■□□ 2.12
PKD1-211ENST00000474088 KRT32Q14532 448 aa28.29■■■□□ 2.12
PKD1-211ENST00000474088 GLT8D2Q9H1C3 349 aa28.29■■■□□ 2.12
PKD1-211ENST00000474088 RC3H2Q9HBD1 1191 aaKnown RBP28.29■■■□□ 2.12
PKD1-211ENST00000474088 SQORQ9Y6N5 450 aa28.29■■■□□ 2.12
PKD1-211ENST00000474088 C5orf67F2Z3F1 127 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 RB1P06400 928 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 LINC00271P0C7V0 271 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 CDC27P30260 824 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 BMPR1AP36894 532 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 SREBF1P36956 1147 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 CLK2P49760 499 aaKnown RBP28.28■■■□□ 2.12
PKD1-211ENST00000474088 AP3B2Q13367 1082 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 TCEAL5Q5H9L2 206 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 ZNF689Q96CS4 500 aaPredicted RBP28.28■■■□□ 2.12
PKD1-211ENST00000474088 CD320Q9NPF0 282 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 PCDHA2Q9Y5H9 948 aa28.28■■■□□ 2.12
PKD1-211ENST00000474088 ADGRA3Q8IWK6 1321 aa28.27■■■□□ 2.12
PKD1-211ENST00000474088 HMGB1P09429 215 aaKnown RBP28.27■■■□□ 2.12
PKD1-211ENST00000474088 CD52P31358 61 aa28.27■■■□□ 2.12
PKD1-211ENST00000474088 CTNNB1P35222 781 aa28.27■■■□□ 2.12
PKD1-211ENST00000474088 RCAN1P53805 252 aa28.27■■■□□ 2.12
PKD1-211ENST00000474088 NEK9Q8TD19 979 aa28.27■■■□□ 2.12
PKD1-211ENST00000474088 TRAPPC12Q8WVT3 735 aa28.27■■■□□ 2.12
PKD1-211ENST00000474088 NSUN3Q9H649 340 aaKnown RBP28.27■■■□□ 2.12
PKD1-211ENST00000474088 RWDD3Q9Y3V2 267 aa28.27■■■□□ 2.12
PKD1-211ENST00000474088 TRPV2Q9Y5S1 764 aa28.27■■■□□ 2.12
PKD1-211ENST00000474088 NLRC5Q86WI3 1866 aa28.26■■■□□ 2.11
PKD1-211ENST00000474088 POTEB3A0JP26 581 aa28.26■■■□□ 2.11
PKD1-211ENST00000474088 M0QZ92 97 aa28.26■■■□□ 2.11
PKD1-211ENST00000474088 CDC45O75419 566 aa28.26■■■□□ 2.11
PKD1-211ENST00000474088 ZNF76P36508 570 aa28.26■■■□□ 2.11
PKD1-211ENST00000474088 POTEBQ6S5H4 581 aa28.26■■■□□ 2.11
PKD1-211ENST00000474088 RTN4RL1Q86UN2 441 aaPredicted RBP28.26■■■□□ 2.11
PKD1-211ENST00000474088 FAM178BQ8IXR5 827 aa28.26■■■□□ 2.11
PKD1-211ENST00000474088 LINC01599Q8WXQ3 324 aa28.26■■■□□ 2.11
PKD1-211ENST00000474088 KHSRPQ92945 711 aaKnown RBP eCLIP28.26■■■□□ 2.11
PKD1-211ENST00000474088 RALGAPA2Q2PPJ7 1873 aa28.25■■■□□ 2.11
PKD1-211ENST00000474088 IGKV6D-21A0A0A0MT36 114 aa28.25■■■□□ 2.11
PKD1-211ENST00000474088 DGKIO75912 1065 aa28.25■■■□□ 2.11
PKD1-211ENST00000474088 SLC26A2P50443 739 aa28.25■■■□□ 2.11
PKD1-211ENST00000474088 TMEM62Q0P6H9 643 aa28.25■■■□□ 2.11
PKD1-211ENST00000474088 BTG3Q14201 252 aaPredicted RBP28.25■■■□□ 2.11
PKD1-211ENST00000474088 PUS10Q3MIT2 529 aaKnown RBP28.25■■■□□ 2.11
PKD1-211ENST00000474088 PTCRAQ6ISU1 281 aaPredicted RBP28.25■■■□□ 2.11
PKD1-211ENST00000474088 NIPA1Q7RTP0 329 aa28.25■■■□□ 2.11
PKD1-211ENST00000474088 CLP1Q92989 425 aaKnown RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms