RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 LENG9Q96B70 501 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 P2RX7Q99572 595 aaKnown RBP15□□□□□ -0.01
BRCA1-209ENST00000470026 HINFPQ9BQA5 517 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 FBXL5Q9UKA1 691 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 PCDHA1Q9Y5I3 950 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 STK24Q9Y6E0 443 aa15□□□□□ -0.01
BRCA1-209ENST00000470026 BZW2Q9Y6E2 419 aaKnown RBP15□□□□□ -0.01
BRCA1-209ENST00000470026 PRKCIP41743 596 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 MRPS25P82663 173 aaKnown RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 ARHGAP4P98171 946 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 CDC37Q16543 378 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 KNOP1Q1ED39 458 aaKnown RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 KIAA0753Q2KHM9 967 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 EMC10Q5UCC4 262 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 FAM133AQ8N9E0 248 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 EIF1ADQ8N9N8 165 aaKnown RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 MXD3Q9BW11 206 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 NRXN2Q9P2S2 1712 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 ADAMTS1Q9UHI8 967 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 HDAC9Q9UKV0 1011 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 GRIN2DO15399 1336 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 POTEFA5A3E0 1075 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 BHMG1C9JSJ3 638 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 F8W031 263 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 PDXKO00764 312 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 RIMBP2O15034 1052 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 FTCDO95954 541 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 POTEIP0CG38 1075 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 ZBTB48P10074 688 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 NR2F2P24468 414 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 CIITAP33076 1130 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 STAT3P40763 770 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 NAP1L1P55209 391 aaKnown RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 CORO7P57737 925 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 PAK2Q13177 524 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 TTMPQ5BVD1 217 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 POTEGQ6S5H5 508 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 POTEEQ6S8J3 1075 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 CD302Q8IX05 232 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 C1orf131Q8NDD1 294 aaKnown RBP14.99□□□□□ -0.01
BRCA1-209ENST00000470026 PACSIN1Q9BY11 444 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 KANSL2Q9H9L4 492 aa14.99□□□□□ -0.01
BRCA1-209ENST00000470026 A6NNZ2 444 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 ONECUT3O60422 494 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 HSF2BPO75031 334 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 UCHL3P15374 230 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 CARSP49589 748 aaKnown RBP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 NFIAQ12857 509 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 TUBB8Q3ZCM7 444 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 SIAH1Q8IUQ4 282 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 KCTD17Q8N5Z5 321 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 TEKT1Q969V4 418 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 FAM20AQ96MK3 541 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 MRIQ9BWK5 157 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 HEXIM1O94992 359 aaKnown RBP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 AFPP02771 609 aaKnown RBP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 EEF2P13639 858 aaKnown RBP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 PON1P27169 355 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 SREBF1P36956 1147 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 PSMC6P62333 389 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 PTK2Q05397 1052 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 SLFN13Q68D06 897 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 ZNF571Q7Z3V5 609 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 ZFPM1Q8IX07 1006 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 LRRC57Q8N9N7 239 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 USP38Q8NB14 1042 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 ERMNQ8TAM6 284 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 ARL8AQ96BM9 186 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 ZDHHC15Q96MV8 337 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 ZIM3Q96PE6 472 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 REEP2Q9BRK0 252 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 ZC3H12CQ9C0D7 883 aaKnown RBP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 ARMCX3Q9UH62 379 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-209ENST00000470026 RSPH14Q9UHP6 348 aa14.98□□□□□ -0.01
BRCA1-209ENST00000470026 EIF3HO15372 352 aaKnown RBP eCLIP14.97□□□□□ -0.01
BRCA1-209ENST00000470026 SLC16A3O15427 465 aaKnown RBP14.97□□□□□ -0.01
BRCA1-209ENST00000470026 MAGEA9P43362 315 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 SCNN1DP51172 638 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 EPHA7Q15375 998 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 SFR1Q86XK3 245 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 C10orf67Q8IYJ2 551 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 SCFD2Q8WU76 684 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 PIK3R5Q8WYR1 880 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 CAPS2Q9BXY5 557 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 SIX2Q9NPC8 291 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 DNM3Q9UQ16 869 aa14.97□□□□□ -0.01
BRCA1-209ENST00000470026 CALUO43852 315 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 FOSP01100 380 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 KRT18P05783 430 aaKnown RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 SLURP2P0DP57 97 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 ACTN1P12814 892 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 SLC9A1P19634 815 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 JAM2P57087 298 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 DNAJC21Q5F1R6 531 aaKnown RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 SLC27A3Q5K4L6 730 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 TATDN1Q6P1N9 297 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms