RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 FAM117BQ6P1L5 589 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 CPLX2Q6PUV4 134 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 NIPA1Q7RTP0 329 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 PLPPR4Q7Z2D5 763 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 MYOCDQ8IZQ8 938 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 ARNTL2Q8WYA1 636 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 ZNF274Q96GC6 653 aaPredicted RBP8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 RAD9AQ99638 391 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 LARP6Q9BRS8 491 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 UPF3BQ9BZI7 483 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 SH3GLB2Q9NR46 395 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 VPS54Q9P1Q0 977 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 TUBE1Q9UJT0 475 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 TRPC6Q9Y210 931 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 NID2Q14112 1375 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 TANC1Q9C0D5 1861 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 KAT6AQ92794 2004 aa8.17□□□□□ -1.1
SNRPD3-205ENST00000468770 A0A0C4DFX4 3053 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 POTEB3A0JP26 581 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 MBLAC1A4D2B0 266 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 RFXAPO00287 272 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 IPO5O00410 1097 aaKnown RBP8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 GTPBP6O43824 516 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 ATG7O95352 703 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 CHRNA1P02708 482 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 RPLP2P05387 115 aaKnown RBP8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 CENPBP07199 599 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 SLC26A2P50443 739 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 SETQ01105 290 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 STK3Q13188 491 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 PLCB4Q15147 1175 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 PRR16Q569H4 304 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 FAM26DQ5JW98 314 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 MARCH8Q5T0T0 291 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 IER5Q5VY09 327 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 FAM160B1Q5W0V3 765 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 MIS18BP1Q6P0N0 1132 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 POTEBQ6S5H4 581 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 RUFY4Q6ZNE9 571 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 RPAINQ86UA6 219 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 MICALL1Q8N3F8 863 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 USP38Q8NB14 1042 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 RASGRP4Q8TDF6 673 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 DNAJB3Q8WWF6 145 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 GBF1Q92538 1859 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 APBB2Q92870 758 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 UIMC1Q96RL1 719 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 PCYT2Q99447 389 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 ZNF577Q9BSK1 485 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 IFIH1Q9BYX4 1025 aaKnown RBP8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 TSPYL2Q9H2G4 693 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 TBC1D22BQ9NU19 505 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 TCEAL9Q9UHQ7 104 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 INSL6Q9Y581 213 aa8.16□□□□□ -1.1
SNRPD3-205ENST00000468770 IGLV3-22A0A075B6J6 115 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 LCHNA4D1U4 455 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 RBAK-RBAKDNI3L0D1 243 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 M0QZ92 97 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 ADAMTS3O15072 1205 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 DHX15O43143 795 aaKnown RBP8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 EIF5BO60841 1220 aaKnown RBP8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 ARHGEF15O94989 841 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 UPP2O95045 317 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 DEXIO95424 95 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 CCNE2O96020 404 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 GHRP10912 638 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 CIITAP33076 1130 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 USP11P51784 963 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 SWSAP1Q6NVH7 229 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 ABHD15Q6UXT9 468 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 CKAP2LQ8IYA6 745 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 CRYGNQ8WXF5 182 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 SYMPKQ92797 1274 aaKnown RBP8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 TOP1MTQ969P6 601 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 TGS1Q96RS0 853 aaKnown RBP8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 COL25A1Q9BXS0 654 aaPredicted RBP8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 C22orf23Q9BZE7 217 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 OSBPL7Q9BZF2 842 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 FAM49AQ9H0Q0 323 aaPredicted RBP8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 ZNF302Q9NR11 478 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 MTUS1Q9ULD2 1270 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 PCDHA2Q9Y5H9 948 aa8.15□□□□□ -1.1
SNRPD3-205ENST00000468770 UNC80Q8N2C7 3258 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 IGKV6D-21A0A0A0MT36 114 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 LINC01553A4QN01 128 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 EPOPA6NHQ4 379 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 HBP1O60381 514 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 CDKL5O76039 1030 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 PSAPP07602 524 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 POU3F3P20264 500 aaPredicted RBP8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 KLRC1P26715 233 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 ANAPC15P60006 121 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 ERVK-21P61565 698 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 MRPS6P82932 125 aaKnown RBP8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 KRT76Q01546 638 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 TMEM62Q0P6H9 643 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 LPIN1Q14693 890 aa8.14□□□□□ -1.11
SNRPD3-205ENST00000468770 SKIV2LQ15477 1246 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms