RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CACNA2D3Q8IZS8 1091 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 LRRC57Q8N9N7 239 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 C1orf131Q8NDD1 294 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 SYN2Q92777 582 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 LRRC45Q96CN5 670 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 TBC1D31Q96DN5 1066 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 MTFR1LQ9H019 292 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 BCAS3Q9H6U6 928 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 AIPL1Q9NZN9 384 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 CEP83Q9Y592 693 aa13.77□□□□□ -0.21
CLCNKA-204ENST00000464764 GOLGB1Q14789 3259 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 CAND2O75155 1236 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 SHBGP04278 402 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 EPS15P42566 896 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 HERC4Q5GLZ8 1057 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 TMC3Q7Z5M5 1100 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 TEX2Q8IWB9 1127 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 UHMK1Q8TAS1 419 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 RBM46Q8TBY0 533 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 DONSONQ9NYP3 566 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 PPP1R12BO60237 982 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 ZBTB48P10074 688 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 NF2P35240 595 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 CASP5P51878 434 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 CUL1Q13616 776 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 TMEM266Q2M3C6 531 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 ALKBH5Q6P6C2 394 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 SCFD1Q8WVM8 642 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 TATDN2Q93075 761 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 HVCN1Q96D96 273 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 SPAG5Q96R06 1193 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 NAGPAQ9UK23 515 aa13.76□□□□□ -0.21
CLCNKA-204ENST00000464764 ITGB4P16144 1822 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 TLDC2A0PJX2 215 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 PGRMC1O00264 195 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 DRD4P21917 467 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 SIK1P57059 783 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 RPS8P62241 208 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 PEX26Q7Z412 305 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 TPCN2Q8NHX9 752 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 SGSM3Q96HU1 749 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 EYA3Q99504 573 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 SPZ1Q9BXG8 430 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 GGA2Q9UJY4 613 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 KIAA1024Q9UPX6 916 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 IFFO1Q0D2I5 559 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 PLCB4Q15147 1175 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 ACCSLQ4AC99 568 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 WLSQ5T9L3 541 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 RUFY4Q6ZNE9 571 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 ACTRT1Q8TDG2 376 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 HAS1Q92839 578 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 NUCKS1Q9H1E3 243 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 GGT7Q9UJ14 662 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 F8VZ95 297 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 MARCH6O60337 910 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 MYH1P12882 1939 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 PRPF4BQ13523 1007 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 CCT6BQ92526 530 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 GLG1Q92896 1179 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 OSGEPQ9NPF4 335 aa13.75□□□□□ -0.21
CLCNKA-204ENST00000464764 CASZ1Q86V15 1759 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 CTNND1O60716 968 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 UCHL3P15374 230 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 CDK8P49336 464 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 BIRC3Q13489 604 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 SF3B3Q15393 1217 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 TMEM119Q4V9L6 283 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 GKAP1Q5VSY0 366 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 HIBCHQ6NVY1 386 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 DAAM2Q86T65 1068 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 PROM2Q8N271 834 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 ACTR5Q9H9F9 607 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 GOPCQ9HD26 462 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 PCDHA2Q9Y5H9 948 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 MMP14P50281 582 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 DPY19L2P1Q6NXN4 242 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 PBKQ96KB5 322 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 IKZF4Q9H2S9 585 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 KCTD10Q9H3F6 313 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 GPCPD1Q9NPB8 672 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 EMILIN3Q9NT22 766 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 SLAIN2Q9P270 581 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 BAIAP2L1Q9UHR4 511 aa13.74□□□□□ -0.21
CLCNKA-204ENST00000464764 POTEB3A0JP26 581 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 POTECB2RU33 542 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 FGGP02679 453 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 NR2F2P24468 414 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 PDE6BP35913 854 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 STAT3P40763 770 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 HSPA2P54652 639 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 PSMD2Q13200 908 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 PPP1R7Q15435 360 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 DCAF17Q5H9S7 520 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 POTEBQ6S5H4 581 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 VEZTQ9HBM0 779 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms