RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 SMCR8Q8TEV9 937 aaPredicted RBP14.9□□□□□ -0.02
TOP3B-213ENST00000457179 CCDC43Q96MW1 224 aaKnown RBP14.9□□□□□ -0.02
TOP3B-213ENST00000457179 MAGEC2Q9UBF1 373 aaPredicted RBP14.9□□□□□ -0.02
TOP3B-213ENST00000457179 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.9□□□□□ -0.02
TOP3B-213ENST00000457179 SLX4Q8IY92 1834 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 EME2A4GXA9 379 aaPredicted RBP14.9□□□□□ -0.02
TOP3B-213ENST00000457179 MEIS1O00470 390 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 CHMP2AO43633 222 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 MRPL12P52815 198 aaKnown RBP14.9□□□□□ -0.02
TOP3B-213ENST00000457179 CYP4A11Q02928 519 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 TSR1Q2NL82 804 aaKnown RBP14.9□□□□□ -0.02
TOP3B-213ENST00000457179 CYP2W1Q8TAV3 490 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 MYCBPAPQ8TBZ2 947 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 RPGRIP1Q96KN7 1286 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 LACRTQ9GZZ8 138 aa14.9□□□□□ -0.02
TOP3B-213ENST00000457179 DDX25Q9UHL0 483 aaKnown RBP14.9□□□□□ -0.02
TOP3B-213ENST00000457179 M0R2N6 131 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 PSMA7O14818 248 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 PPP1R37O75864 691 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 CDC25CP30307 473 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 ZNF76P36508 570 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 CXCL9Q07325 125 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 FAM83BQ5T0W9 1011 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 PAPD7Q5XG87 772 aaKnown RBP14.89□□□□□ -0.03
TOP3B-213ENST00000457179 SIAH1Q8IUQ4 282 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 ADSSL1Q8N142 457 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 KIF9Q9HAQ2 790 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 LIMA1Q9UHB6 759 aaKnown RBP14.89□□□□□ -0.03
TOP3B-213ENST00000457179 SERPINA10Q9UK55 444 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 ASTN2O75129 1339 aaPredicted RBP14.89□□□□□ -0.03
TOP3B-213ENST00000457179 TRIM21P19474 475 aaKnown RBP14.89□□□□□ -0.03
TOP3B-213ENST00000457179 NR1D1P20393 614 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 CYP27A1Q02318 531 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 PTGISQ16647 500 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 GPATCH4Q5T3I0 446 aaKnown RBP14.89□□□□□ -0.03
TOP3B-213ENST00000457179 IQCEQ6IPM2 695 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 RSBN1LQ6PCB5 846 aaPredicted RBP14.89□□□□□ -0.03
TOP3B-213ENST00000457179 CALML4Q96GE6 196 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 CCDC17Q96LX7 622 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 EXOC1Q9NV70 894 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 ATXN2Q99700 1313 aaKnown RBP14.89□□□□□ -0.03
TOP3B-213ENST00000457179 ESYT3A0FGR9 886 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 RCCD1A6NED2 376 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 SPDYE6P0CI01 402 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 MTIF2P46199 727 aaKnown RBP14.89□□□□□ -0.03
TOP3B-213ENST00000457179 GUCY2FP51841 1108 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 IRX1P78414 480 aaPredicted RBP14.89□□□□□ -0.03
TOP3B-213ENST00000457179 ACCSLQ4AC99 568 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 FUKQ8N0W3 1084 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 IFT81Q8WYA0 676 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 SPDL1Q96EA4 605 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 AGPAT5Q9NUQ2 364 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 PCDHA12Q9UN75 941 aa14.89□□□□□ -0.03
TOP3B-213ENST00000457179 KRT86O43790 486 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 KLRC4O43908 158 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 HMGB2P26583 209 aaKnown RBP14.88□□□□□ -0.03
TOP3B-213ENST00000457179 DNA2P51530 1060 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 SPAG1Q07617 926 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 CFAP58Q5T655 872 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 ZNF70Q9UC06 446 aaPredicted RBP14.88□□□□□ -0.03
TOP3B-213ENST00000457179 LUC7L2Q9Y383 392 aaKnown RBP14.88□□□□□ -0.03
TOP3B-213ENST00000457179 FAM170AA1A519 330 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 TMCO5BA8MYB1 307 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 IPO7O95373 1038 aaKnown RBP14.88□□□□□ -0.03
TOP3B-213ENST00000457179 EPHB4P54760 987 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 CCDC181Q5TID7 509 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 BAIAP2L1Q9UHR4 511 aa14.88□□□□□ -0.03
TOP3B-213ENST00000457179 KIF3CO14782 793 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 BMP3P12645 472 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 TMEM266Q2M3C6 531 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 TMEM179Q6ZVK1 233 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 MB21D1Q8N884 522 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 NOC3LQ8WTT2 800 aaKnown RBP14.87□□□□□ -0.03
TOP3B-213ENST00000457179 THOC1Q96FV9 657 aaKnown RBP14.87□□□□□ -0.03
TOP3B-213ENST00000457179 ZNF831Q5JPB2 1677 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 SPDYE3A6NKU9 549 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 ENO4A6NNW6 628 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 H7C1D1 291 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 KIAA1755Q5JYT7 1200 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 KRT79Q5XKE5 535 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 ANKRD40Q6AI12 368 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 KCNK18Q7Z418 384 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 GLIS3Q8NEA6 775 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 TUBGCP2Q9BSJ2 902 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 PIM2Q9P1W9 311 aa14.87□□□□□ -0.03
TOP3B-213ENST00000457179 DNM1LO00429 736 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 RTN2O75298 545 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 KRT18P05783 430 aaKnown RBP14.86□□□□□ -0.03
TOP3B-213ENST00000457179 INHBEP58166 350 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 MAATS1Q7Z4T9 603 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 SUPT20HQ8NEM7 779 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 PYM1Q9BRP8 204 aaKnown RBP14.86□□□□□ -0.03
TOP3B-213ENST00000457179 ZSCAN5CA6NGD5 496 aaPredicted RBP14.86□□□□□ -0.03
TOP3B-213ENST00000457179 RASSF7Q02833 373 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 GALNT17Q6IS24 598 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 YTHDF3Q7Z739 585 aaKnown RBP14.86□□□□□ -0.03
TOP3B-213ENST00000457179 FBXO11Q86XK2 927 aa14.86□□□□□ -0.03
TOP3B-213ENST00000457179 OR8K1Q8NGG5 319 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms