RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 CCDC194A0A1B0GVG4 234 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 FAM205CA6NFA0 338 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 ATG7O95352 703 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 RFC2P35250 354 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 ADAM17P78536 824 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 MBTPS1Q14703 1052 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 PLCB4Q15147 1175 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 TCTN1Q2MV58 587 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 EARS2Q5JPH6 523 aaKnown RBP28.19■■■□□ 2.1
MSH2-203ENST00000454849 SWSAP1Q6NVH7 229 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 KRT25Q7Z3Z0 450 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 TET1Q8NFU7 2136 aa28.19■■■□□ 2.1
MSH2-203ENST00000454849 NRCAMQ92823 1304 aa28.18■■■□□ 2.1
MSH2-203ENST00000454849 INSRRP14616 1297 aa28.18■■■□□ 2.1
MSH2-203ENST00000454849 RBL2Q08999 1139 aa28.18■■■□□ 2.1
MSH2-203ENST00000454849 NR5A1Q13285 461 aa28.18■■■□□ 2.1
MSH2-203ENST00000454849 LETM2Q2VYF4 491 aa28.18■■■□□ 2.1
MSH2-203ENST00000454849 PIK3AP1Q6ZUJ8 805 aa28.18■■■□□ 2.1
MSH2-203ENST00000454849 CCDC60Q8IWA6 550 aaPredicted RBP28.18■■■□□ 2.1
MSH2-203ENST00000454849 OSBPL7Q9BZF2 842 aa28.18■■■□□ 2.1
MSH2-203ENST00000454849 TBC1D22BQ9NU19 505 aa28.18■■■□□ 2.1
MSH2-203ENST00000454849 SLC4A7Q9Y6M7 1214 aa28.18■■■□□ 2.1
MSH2-203ENST00000454849 CHMP2AO43633 222 aa28.17■■■□□ 2.1
MSH2-203ENST00000454849 RABGGTBP53611 331 aa28.17■■■□□ 2.1
MSH2-203ENST00000454849 GUCY1B3Q02153 619 aa28.17■■■□□ 2.1
MSH2-203ENST00000454849 MARCH8Q5T0T0 291 aa28.17■■■□□ 2.1
MSH2-203ENST00000454849 GPR153Q6NV75 609 aa28.17■■■□□ 2.1
MSH2-203ENST00000454849 FAM177A1Q8N128 213 aaPredicted RBP28.17■■■□□ 2.1
MSH2-203ENST00000454849 MTIF3Q9H2K0 278 aaKnown RBP28.17■■■□□ 2.1
MSH2-203ENST00000454849 SAMM50Q9Y512 469 aa28.17■■■□□ 2.1
MSH2-203ENST00000454849 RSPH10B2B2RC85 870 aa28.16■■■□□ 2.1
MSH2-203ENST00000454849 PFKMP08237 780 aa28.16■■■□□ 2.1
MSH2-203ENST00000454849 RSPH10BP0C881 870 aa28.16■■■□□ 2.1
MSH2-203ENST00000454849 MIS18BP1Q6P0N0 1132 aa28.16■■■□□ 2.1
MSH2-203ENST00000454849 PLPPR4Q7Z2D5 763 aa28.16■■■□□ 2.1
MSH2-203ENST00000454849 UPF2Q9HAU5 1272 aaKnown RBP28.16■■■□□ 2.1
MSH2-203ENST00000454849 ZNF302Q9NR11 478 aa28.16■■■□□ 2.1
MSH2-203ENST00000454849 MTMR10Q9NXD2 777 aa28.16■■■□□ 2.1
MSH2-203ENST00000454849 TCEAL9Q9UHQ7 104 aa28.16■■■□□ 2.1
MSH2-203ENST00000454849 IGKV6D-21A0A0A0MT36 114 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 POTEB3A0JP26 581 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 SLC37A4O43826 429 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 GAS7O60861 476 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 ACTN1P12814 892 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 DNAJB2P25686 324 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 ZNF697Q5TEC3 545 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 PDXDC2PQ6P474 469 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 POTEBQ6S5H4 581 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 PBX4Q9BYU1 374 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 TTYH1Q9H313 450 aaPredicted RBP28.15■■■□□ 2.1
MSH2-203ENST00000454849 TUBE1Q9UJT0 475 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 GTF3C3Q9Y5Q9 886 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 TANC1Q9C0D5 1861 aa28.15■■■□□ 2.1
MSH2-203ENST00000454849 MYOGP15173 224 aa28.14■■■□□ 2.1
MSH2-203ENST00000454849 ATP4AP20648 1035 aa28.14■■■□□ 2.1
MSH2-203ENST00000454849 KRT2P35908 639 aa28.14■■■□□ 2.1
MSH2-203ENST00000454849 Q4G0T1 1027 aa28.14■■■□□ 2.1
MSH2-203ENST00000454849 LRCH2Q5VUJ6 765 aa28.14■■■□□ 2.1
MSH2-203ENST00000454849 FAM160B1Q5W0V3 765 aa28.14■■■□□ 2.1
MSH2-203ENST00000454849 KRT40Q6A162 431 aa28.14■■■□□ 2.1
MSH2-203ENST00000454849 ZNF746Q6NUN9 644 aaPredicted RBP28.14■■■□□ 2.1
MSH2-203ENST00000454849 CKAP2LQ8IYA6 745 aa28.14■■■□□ 2.1
MSH2-203ENST00000454849 SLC5A5Q92911 643 aa28.14■■■□□ 2.1
MSH2-203ENST00000454849 ZSCAN31Q96LW9 406 aaPredicted RBP28.14■■■□□ 2.1
MSH2-203ENST00000454849 FAM49AQ9H0Q0 323 aaPredicted RBP28.14■■■□□ 2.1
MSH2-203ENST00000454849 DDX25Q9UHL0 483 aaKnown RBP28.14■■■□□ 2.1
MSH2-203ENST00000454849 KAT6AQ92794 2004 aa28.14■■■□□ 2.09
MSH2-203ENST00000454849 CYP3A7-CYP3A51PA0A087WV96 503 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 BTBD18B2RXH4 712 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 CYP3A7P24462 503 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 KRT76Q01546 638 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 RABEP1Q15276 862 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 TMCO2Q7Z6W1 182 aaPredicted RBP28.13■■■□□ 2.09
MSH2-203ENST00000454849 DNAJB3Q8WWF6 145 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 SEMA6BQ9H3T3 888 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 UNC45AQ9H3U1 944 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 GABBR1Q9UBS5 961 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 PCDHA10Q9Y5I2 948 aa28.13■■■□□ 2.09
MSH2-203ENST00000454849 CXCL10P02778 98 aa28.12■■■□□ 2.09
MSH2-203ENST00000454849 PSAPP07602 524 aa28.12■■■□□ 2.09
MSH2-203ENST00000454849 ATP2A2P16615 1042 aaKnown RBP28.12■■■□□ 2.09
MSH2-203ENST00000454849 TRIM29Q14134 588 aa28.12■■■□□ 2.09
MSH2-203ENST00000454849 NEK8Q86SG6 692 aa28.12■■■□□ 2.09
MSH2-203ENST00000454849 TIFAQ96CG3 184 aa28.12■■■□□ 2.09
MSH2-203ENST00000454849 TEKT3Q9BXF9 490 aa28.12■■■□□ 2.09
MSH2-203ENST00000454849 CCNT1O60563 726 aaKnown RBP28.11■■■□□ 2.09
MSH2-203ENST00000454849 CD2BP2O95400 341 aaKnown RBP28.11■■■□□ 2.09
MSH2-203ENST00000454849 MMP1P03956 469 aa28.11■■■□□ 2.09
MSH2-203ENST00000454849 TNFRSF25Q93038 417 aa28.11■■■□□ 2.09
MSH2-203ENST00000454849 MBOAT7Q96N66 472 aa28.11■■■□□ 2.09
MSH2-203ENST00000454849 RIT2Q99578 217 aa28.11■■■□□ 2.09
MSH2-203ENST00000454849 DISC1Q9NRI5 854 aa28.11■■■□□ 2.09
MSH2-203ENST00000454849 YBX2Q9Y2T7 364 aaKnown RBP28.11■■■□□ 2.09
MSH2-203ENST00000454849 MBLAC1A4D2B0 266 aaPredicted RBP28.1■■■□□ 2.09
MSH2-203ENST00000454849 RRN3P2A6NIE6 340 aa28.1■■■□□ 2.09
MSH2-203ENST00000454849 PSMD10O75832 226 aa28.1■■■□□ 2.09
MSH2-203ENST00000454849 CHRNA1P02708 482 aa28.1■■■□□ 2.09
MSH2-203ENST00000454849 TMEM62Q0P6H9 643 aa28.1■■■□□ 2.09
MSH2-203ENST00000454849 CNKSR3Q6P9H4 555 aa28.1■■■□□ 2.09
MSH2-203ENST00000454849 SMAP1Q8IYB5 467 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms