RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ARMCX3Q9UH62 379 aaPredicted RBP18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 ATAD5Q96QE3 1844 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 MAGEA9P43362 315 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 SCNN1DP51172 638 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 CORO7P57737 925 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 AP3B2Q13367 1082 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 SF3B2Q13435 895 aaKnown RBP18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 FRMD5Q7Z6J6 570 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 CATSPER3Q86XQ3 398 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 SP8Q8IXZ3 490 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 ERMNQ8TAM6 284 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 INPP4AQ96PE3 977 aaPredicted RBP18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 KRT12Q99456 494 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 DNM3Q9UQ16 869 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 TRAF3IP3Q9Y228 551 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 BZW2Q9Y6E2 419 aaKnown RBP18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 A6NNZ2 444 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 PTK2Q05397 1052 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 KNOP1Q1ED39 458 aaKnown RBP18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 TUBB8Q3ZCM7 444 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 CDC42EP5Q6NZY7 148 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 TAF4BQ92750 862 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 MBOAT7Q96N66 472 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 PLCB1Q9NQ66 1216 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 ESYT3A0FGR9 886 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 BTNL10A8MVZ5 291 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 PPEF1O14829 653 aaPredicted RBP18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 CASP5P51878 434 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 CDC37Q16543 378 aaPredicted RBP18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 PRR16Q569H4 304 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 TTMPQ5BVD1 217 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 CFAP58Q5T655 872 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 ARL8AQ96BM9 186 aa18.09■□□□□ 0.49
SEMA3B-207ENST00000441915 ZSCAN5CA6NGD5 496 aaPredicted RBP18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 EIF3HO15372 352 aaKnown RBP eCLIP18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 CLSTN1O94985 981 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 AFPP02771 609 aaKnown RBP18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 XRCC5P13010 732 aaKnown RBP18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 UCHL3P15374 230 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 GTF2A1P52655 376 aaPredicted RBP18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 RNASE9P60153 205 aaKnown RBP18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 GNGT1P63211 74 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 TNNC1P63316 161 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 ARHGAP4P98171 946 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 GIT2Q14161 759 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 IFI16Q16666 785 aaKnown RBP18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 EXOC3L4Q17RC7 722 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 BCAS4Q8TDM0 211 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 TEKT1Q969V4 418 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 CCDC43Q96MW1 224 aaKnown RBP18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 USP21Q9UK80 565 aa18.08■□□□□ 0.49
SEMA3B-207ENST00000441915 MEIS2O14770 477 aa18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 KRT14P02533 472 aa18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 ACTN1P12814 892 aa18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 SLC9A1P19634 815 aa18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 RPA1P27694 616 aa18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 PABPC4Q13310 644 aaKnown RBP eCLIP18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 RPS6KA1Q15418 735 aa18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 IRF2BP2Q7Z5L9 587 aa18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 SYT2Q8N9I0 419 aaPredicted RBP18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 USP38Q8NB14 1042 aa18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 EHD4Q9H223 541 aa18.08■□□□□ 0.48
SEMA3B-207ENST00000441915 CES2O00748 559 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 TBX3O15119 743 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 CALUO43852 315 aaPredicted RBP18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 SPIRE1Q08AE8 756 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 HHIPL2Q6UWX4 724 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 IQCKQ8N0W5 287 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 ETNPPLQ8TBG4 499 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 DCAF4Q8WV16 495 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 MXD3Q9BW11 206 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 FAM107BQ9H098 131 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 EBAG9O00559 213 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 PDXKO00764 312 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 KCNK3O14649 394 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 FAM153BP0C7A2 387 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 EEF2P13639 858 aaKnown RBP18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 CCT5P48643 541 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 PSMC6P62333 389 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 NFIAQ12857 509 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 FAM153CQ494X1 144 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 SLFN13Q68D06 897 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 ZNF571Q7Z3V5 609 aaPredicted RBP18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 WHAMMQ8TF30 809 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 REEP2Q9BRK0 252 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 FAM153AQ9UHL3 310 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 LTBP4Q8N2S1 1624 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 ANKRD65E5RJM6 399 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 MEIS1O00470 390 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 TOM1O60784 492 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 SLURP2P0DP57 97 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 SKOR1P84550 965 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 MCTP2Q6DN12 878 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 APOBEC3HQ6NTF7 200 aaKnown RBP18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 SFR1Q86XK3 245 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 MREGQ8N565 214 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 MKL1Q969V6 931 aa18.07■□□□□ 0.48
SEMA3B-207ENST00000441915 GREB1LQ9C091 1923 aaPredicted RBP18.06■□□□□ 0.48
SEMA3B-207ENST00000441915 GRIN2DO15399 1336 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms