RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 RIC8AQ9NPQ8 531 aa17.31■□□□□ 0.36
CSNK1E-208ENST00000431611 COL4A6Q14031 1691 aa17.31■□□□□ 0.36
CSNK1E-208ENST00000431611 MICAL3Q7RTP6 2002 aa17.31■□□□□ 0.36
CSNK1E-208ENST00000431611 CNTNAP5Q8WYK1 1306 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 FOSP01100 380 aaPredicted RBP17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 RB1P06400 928 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 CTNNB1P35222 781 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 MRPS6P82932 125 aaKnown RBP17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 RTN1Q16799 776 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 PUS10Q3MIT2 529 aaKnown RBP17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 TCEAL5Q5H9L2 206 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 TMEM31Q5JXX7 168 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 IER5Q5VY09 327 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 PTCRAQ6ISU1 281 aaPredicted RBP17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 TYW1BQ6NUM6 668 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 PPP1R18Q6NYC8 613 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 TSHZ1Q6ZSZ6 1077 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 TEX2Q8IWB9 1127 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 FAM178BQ8IXR5 827 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 CYP2W1Q8TAV3 490 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 KHSRPQ92945 711 aaKnown RBP eCLIP17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 ZBTB10Q96DT7 871 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 PGBD1Q96JS3 809 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 LRFN3Q9BTN0 628 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 FAM49AQ9H0Q0 323 aaPredicted RBP17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 NSUN3Q9H649 340 aaKnown RBP17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 TRPC6Q9Y210 931 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 V9GY48 417 aaPredicted RBP17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 NCOR1O75376 2440 aa17.3■□□□□ 0.36
CSNK1E-208ENST00000431611 DOCK5Q9H7D0 1870 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 NFASCO94856 1347 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 ADGRA3Q8IWK6 1321 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 C5orf67F2Z3F1 127 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 ZBTB43O43298 467 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 ARP10275 920 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 IL9P15248 144 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 BMPR1AP36894 532 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 ADCY7P51828 1080 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 ACTR2P61160 394 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 EXOSC10Q01780 885 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 CEP55Q53EZ4 464 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 BMP2KLQ5H9B9 411 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 DHX32Q7L7V1 743 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 PLPPR4Q7Z2D5 763 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 GJD3Q8N144 294 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 NEK9Q8TD19 979 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 PABPC5Q96DU9 382 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 TCEANC2Q96MN5 208 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 C11orf84Q9BUA3 381 aaPredicted RBP17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 ANO3Q9BYT9 981 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 BRPF3Q9ULD4 1205 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 RWDD3Q9Y3V2 267 aa17.29■□□□□ 0.36
CSNK1E-208ENST00000431611 SMCO2A6NFE2 343 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 GRXCR2A6NFK2 248 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 H3BQ06 376 aaPredicted RBP17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 hCG_1984214I3L0E3 225 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 M0QZ92 97 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 CD52P31358 61 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 STAT5BP51692 787 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 FUT2Q10981 343 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 BTG3Q14201 252 aaPredicted RBP17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 PLCB4Q15147 1175 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 EP400NLQ6ZTU2 488 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 ZNF713Q8N859 430 aaPredicted RBP17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 LMAN2LQ9H0V9 348 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 AGO3Q9H9G7 860 aaKnown RBP17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 RC3H2Q9HBD1 1191 aaKnown RBP17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 AGO4Q9HCK5 861 aaKnown RBP17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 PCDHA2Q9Y5H9 948 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
CSNK1E-208ENST00000431611 PI4K2BG5E9Z4 385 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 STXBP3O00186 592 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 DGKIO75912 1065 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 LINC00271P0C7V0 271 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 ZNF76P36508 570 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 TMEM62Q0P6H9 643 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 ITGB3BPQ13352 177 aaPredicted RBP17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 TRAPPC12Q8WVT3 735 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 CLP1Q92989 425 aaKnown RBP17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 ZNF689Q96CS4 500 aaPredicted RBP17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 FTHL17Q9BXU8 183 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 GLT8D2Q9H1C3 349 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 TMEM260Q9NX78 707 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 BARHL2Q9NY43 387 aa17.27■□□□□ 0.36
CSNK1E-208ENST00000431611 KLF18A0A0U1RQI7 1052 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 POTEB3A0JP26 581 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 GOLGA8BA8MQT2 603 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 MEIS1O00470 390 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 GRM6O15303 877 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 NCK2O43639 380 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 GPR37L1O60883 481 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 SSTR3P32745 418 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 SREBF1P36956 1147 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 PLA2G5P39877 138 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 SLC26A2P50443 739 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 AP3B2Q13367 1082 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 COL19A1Q14993 1142 aa17.26■□□□□ 0.35
CSNK1E-208ENST00000431611 ADCK5Q3MIX3 580 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms