RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 LGR5O75473 907 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 CXCL10P02778 98 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 HOXC8P31273 242 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 USP11P51784 963 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 GRIN2CQ14957 1233 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 PPP2R2DQ66LE6 453 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 TAF2Q6P1X5 1199 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 PLPPR4Q7Z2D5 763 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 CKAP2LQ8IYA6 745 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 FAM177A1Q8N128 213 aaPredicted RBP23.44■■□□□ 1.34
HSPG2-205ENST00000427897 WASF1Q92558 559 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 GAS2L1Q99501 681 aaPredicted RBP23.44■■□□□ 1.34
HSPG2-205ENST00000427897 TUBE1Q9UJT0 475 aa23.44■■□□□ 1.34
HSPG2-205ENST00000427897 IGLV3-22A0A075B6J6 115 aa23.43■■□□□ 1.34
HSPG2-205ENST00000427897 TBCKQ8TEA7 893 aa23.43■■□□□ 1.34
HSPG2-205ENST00000427897 CRYGNQ8WXF5 182 aa23.43■■□□□ 1.34
HSPG2-205ENST00000427897 LAMA2P24043 3122 aaKnown RBP23.42■■□□□ 1.34
HSPG2-205ENST00000427897 POTEB3A0JP26 581 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 SEC24BO95487 1268 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 INSRRP14616 1297 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 SLC26A2P50443 739 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 PDXDC2PQ6P474 469 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 POTEBQ6S5H4 581 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 HERC6Q8IVU3 1022 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 SEPT8Q92599 483 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 AIFM3Q96NN9 605 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 ZNF302Q9NR11 478 aa23.42■■□□□ 1.34
HSPG2-205ENST00000427897 ORC3Q9UBD5 711 aaPredicted RBP23.42■■□□□ 1.34
HSPG2-205ENST00000427897 YBX2Q9Y2T7 364 aaKnown RBP23.42■■□□□ 1.34
HSPG2-205ENST00000427897 GBF1Q92538 1859 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 TLL1O43897 1013 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 ATG7O95352 703 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 PSAPP07602 524 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 MYOGP15173 224 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 CIITAP33076 1130 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 WDR5P61964 334 aaKnown RBP23.41■■□□□ 1.34
HSPG2-205ENST00000427897 ADAM17P78536 824 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 KRT76Q01546 638 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 GPNMBQ14956 572 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 PLCB4Q15147 1175 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 SWSAP1Q6NVH7 229 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 DBF4BQ8NFT6 615 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 PCYT2Q99447 389 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 KCNJ14Q9UNX9 436 aa23.41■■□□□ 1.34
HSPG2-205ENST00000427897 STK36Q9NRP7 1315 aa23.4■■□□□ 1.34
HSPG2-205ENST00000427897 CCDC194A0A1B0GVG4 234 aa23.4■■□□□ 1.34
HSPG2-205ENST00000427897 M0QZ92 97 aa23.4■■□□□ 1.34
HSPG2-205ENST00000427897 RPLP2P05387 115 aaKnown RBP23.4■■□□□ 1.34
HSPG2-205ENST00000427897 NONOQ15233 471 aaKnown RBP eCLIP23.4■■□□□ 1.34
HSPG2-205ENST00000427897 ZNF746Q6NUN9 644 aaPredicted RBP23.4■■□□□ 1.34
HSPG2-205ENST00000427897 TRAF7Q6Q0C0 670 aa23.4■■□□□ 1.34
HSPG2-205ENST00000427897 ABHD15Q6UXT9 468 aa23.4■■□□□ 1.34
HSPG2-205ENST00000427897 KRT25Q7Z3Z0 450 aa23.4■■□□□ 1.34
HSPG2-205ENST00000427897 SMAP1Q8IYB5 467 aaPredicted RBP23.4■■□□□ 1.34
HSPG2-205ENST00000427897 NECAB1Q8N987 351 aa23.4■■□□□ 1.34
HSPG2-205ENST00000427897 DNAJB3Q8WWF6 145 aa23.4■■□□□ 1.34
HSPG2-205ENST00000427897 PRDM12Q9H4Q4 367 aa23.4■■□□□ 1.34
HSPG2-205ENST00000427897 HBP1O60381 514 aa23.39■■□□□ 1.33
HSPG2-205ENST00000427897 GAS7O60861 476 aa23.39■■□□□ 1.33
HSPG2-205ENST00000427897 CCNE2O96020 404 aa23.39■■□□□ 1.33
HSPG2-205ENST00000427897 AMHP03971 560 aa23.39■■□□□ 1.33
HSPG2-205ENST00000427897 MBTPS1Q14703 1052 aa23.39■■□□□ 1.33
HSPG2-205ENST00000427897 RUFY4Q6ZNE9 571 aa23.39■■□□□ 1.33
HSPG2-205ENST00000427897 TRMT1LQ7Z2T5 733 aaKnown RBP23.39■■□□□ 1.33
HSPG2-205ENST00000427897 DAGLBQ8NCG7 672 aa23.39■■□□□ 1.33
HSPG2-205ENST00000427897 MAFAQ8NHW3 353 aaPredicted RBP23.39■■□□□ 1.33
HSPG2-205ENST00000427897 FAM49AQ9H0Q0 323 aaPredicted RBP23.39■■□□□ 1.33
HSPG2-205ENST00000427897 BRMS1Q9HCU9 246 aa23.39■■□□□ 1.33
HSPG2-205ENST00000427897 PCDHA10Q9Y5I2 948 aa23.39■■□□□ 1.33
HSPG2-205ENST00000427897 DHX15O43143 795 aaKnown RBP23.38■■□□□ 1.33
HSPG2-205ENST00000427897 CA3P07451 260 aa23.38■■□□□ 1.33
HSPG2-205ENST00000427897 IGFBP4P22692 258 aa23.38■■□□□ 1.33
HSPG2-205ENST00000427897 TRIM29Q14134 588 aa23.38■■□□□ 1.33
HSPG2-205ENST00000427897 PLEKHG4Q58EX7 1191 aa23.38■■□□□ 1.33
HSPG2-205ENST00000427897 IER5Q5VY09 327 aa23.38■■□□□ 1.33
HSPG2-205ENST00000427897 TEKT3Q9BXF9 490 aa23.38■■□□□ 1.33
HSPG2-205ENST00000427897 MARCH6O60337 910 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 DTNBO60941 627 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 DEFB103AP81534 67 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 ME3Q16798 604 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 FAM26DQ5JW98 314 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 LRCH2Q5VUJ6 765 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 FAM117BQ6P1L5 589 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 TET1Q8NFU7 2136 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 TRAPPC12Q8WVT3 735 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 APBB2Q92870 758 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 PHF20Q9BVI0 1012 aa23.37■■□□□ 1.33
HSPG2-205ENST00000427897 IGKV6D-21A0A0A0MT36 114 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 MBLAC1A4D2B0 266 aaPredicted RBP23.36■■□□□ 1.33
HSPG2-205ENST00000427897 WDR64B1ANS9 1081 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 MSH4O15457 936 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 CHMP2AO43633 222 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 LETM2Q2VYF4 491 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 ZNF484Q5JVG2 852 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 MARCH8Q5T0T0 291 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 RPAINQ86UA6 219 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 CCDC60Q8IWA6 550 aaPredicted RBP23.36■■□□□ 1.33
HSPG2-205ENST00000427897 MYOCDQ8IZQ8 938 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 GTF3C6Q969F1 213 aa23.36■■□□□ 1.33
HSPG2-205ENST00000427897 IL17RAQ96F46 866 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms