RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 IFT122Q9HBG6 1241 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 USP17L10C9JJH3 530 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 INHBAP08476 426 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 PLA2G4BP0C869 781 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 PMLP29590 882 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 COPB1P53618 953 aaKnown RBP14.23□□□□□ -0.13
SPG11-202ENST00000427534 CDR2Q01850 454 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 DNAJC24Q6P3W2 148 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 FBXO18Q8NFZ0 1043 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 FAM71BQ8TC56 605 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 ZBTB12Q9Y330 459 aaPredicted RBP14.23□□□□□ -0.13
SPG11-202ENST00000427534 YWHAHQ04917 246 aaPredicted RBP14.23□□□□□ -0.13
SPG11-202ENST00000427534 MTMR1Q13613 665 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 MAGOHBQ96A72 148 aaKnown RBP14.23□□□□□ -0.13
SPG11-202ENST00000427534 N4BP1O75113 896 aaKnown RBP14.23□□□□□ -0.13
SPG11-202ENST00000427534 HMBSP08397 361 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 ARHGEF1Q92888 912 aaKnown RBP14.23□□□□□ -0.13
SPG11-202ENST00000427534 TSKSQ9UJT2 592 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 GNGT2O14610 69 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 HADHAP40939 763 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 TRIML1Q8N9V2 468 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 NGRNQ9NPE2 291 aaKnown RBP14.23□□□□□ -0.13
SPG11-202ENST00000427534 PPP2R2CQ9Y2T4 447 aa14.23□□□□□ -0.13
SPG11-202ENST00000427534 CARMIL3Q8ND23 1372 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 POTEMA6NI47 508 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 ESRRBO95718 433 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 GNGT1P63211 74 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 SPOPLQ6IQ16 392 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 PGBD3Q8N328 593 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 GRK7Q8WTQ7 553 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 K7ERI5 159 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 SLC16A4O15374 487 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 SWSAP1Q6NVH7 229 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 RSRC1Q96IZ7 334 aaKnown RBP14.22□□□□□ -0.13
SPG11-202ENST00000427534 OPHN1O60890 802 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 TROVE2P10155 538 aaKnown RBP eCLIP14.22□□□□□ -0.13
SPG11-202ENST00000427534 PCP11498 1178 aaKnown RBP14.22□□□□□ -0.13
SPG11-202ENST00000427534 ARL4AP40617 200 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 GARSP41250 739 aaKnown RBP14.22□□□□□ -0.13
SPG11-202ENST00000427534 ZNF157P51786 506 aaPredicted RBP14.22□□□□□ -0.13
SPG11-202ENST00000427534 LMBRD2Q68DH5 695 aaPredicted RBP14.22□□□□□ -0.13
SPG11-202ENST00000427534 GOLGA5Q8TBA6 731 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 CELF1Q92879 486 aaKnown RBP14.22□□□□□ -0.13
SPG11-202ENST00000427534 PFDN6O15212 129 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 SGO2Q562F6 1265 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 FASTKD5Q7L8L6 764 aaKnown RBP14.22□□□□□ -0.13
SPG11-202ENST00000427534 DDX53Q86TM3 631 aaKnown RBP14.22□□□□□ -0.13
SPG11-202ENST00000427534 LCA5Q86VQ0 697 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 BAG5Q9UL15 447 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 LRRD1A4D1F6 860 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 PRPSAP2O60256 369 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 SEC31AO94979 1220 aaKnown RBP14.22□□□□□ -0.13
SPG11-202ENST00000427534 INPP5BP32019 993 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 MCTP2Q6DN12 878 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 APOA5Q6Q788 366 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 HEMGNQ9BXL5 484 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 GSTA4O15217 222 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 BBS5Q8N3I7 341 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 SPATA33Q96N06 139 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 FAM213AQ9BRX8 229 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 BHMT2Q9H2M3 363 aa14.22□□□□□ -0.13
SPG11-202ENST00000427534 KCNA1Q09470 495 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 BHMTQ93088 406 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 PCDHA6Q9UN73 950 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 PCDHA8Q9Y5H6 950 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 WDR17Q8IZU2 1322 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 P3H4Q92791 437 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 HEY1Q9Y5J3 304 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 PLTPP55058 493 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 SLMAPQ14BN4 828 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 GPATCH4Q5T3I0 446 aaKnown RBP14.21□□□□□ -0.13
SPG11-202ENST00000427534 MAIP1Q8WWC4 291 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 ANLNQ9NQW6 1124 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 A0A1W2PQ27 194 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 A0A1W2PQ64 194 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 A0A1W2PQD8 194 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 WDR64B1ANS9 1081 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 CFLARO15519 480 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 MCAMP43121 646 aa14.21□□□□□ -0.13
SPG11-202ENST00000427534 GPC4O75487 556 aa14.21□□□□□ -0.14
SPG11-202ENST00000427534 CPB1P15086 417 aa14.21□□□□□ -0.14
SPG11-202ENST00000427534 RBM6P78332 1123 aaKnown RBP14.21□□□□□ -0.14
SPG11-202ENST00000427534 LRGUKQ96M69 825 aa14.21□□□□□ -0.14
SPG11-202ENST00000427534 HYOU1Q9Y4L1 999 aa14.21□□□□□ -0.14
SPG11-202ENST00000427534 H2AFZP0C0S5 128 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 RUFY4Q6ZNE9 571 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 H2AFVQ71UI9 128 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 RAB44Q7Z6P3 723 aaPredicted RBP14.2□□□□□ -0.14
SPG11-202ENST00000427534 CFAP61Q8NHU2 1237 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 CXorf38Q8TB03 319 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 SAMSN1Q9NSI8 373 aaKnown RBP14.2□□□□□ -0.14
SPG11-202ENST00000427534 SLC8A2Q9UPR5 921 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 ATP8A1Q9Y2Q0 1164 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 NEDD4P46934 1319 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 SOWAHDA6NJG2 315 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 CD2BP2O95400 341 aaKnown RBP14.2□□□□□ -0.14
SPG11-202ENST00000427534 LONP1P36776 959 aaKnown RBP14.2□□□□□ -0.14
SPG11-202ENST00000427534 ZNF568Q3ZCX4 644 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 MRFAP1L1Q96HT8 127 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 SIK2Q9H0K1 926 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms