RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 EBF2Q9HAK2 575 aa14.14□□□□□ -0.15
TOP2B-203ENST00000424225 IRS2Q9Y4H2 1338 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 ADAMTS2O95450 1211 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 CALM1P0DP23 149 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 CALM2P0DP24 149 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 CALM3P0DP25 149 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 LRRC34Q8IZ02 419 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 MARCH10Q8NA82 808 aaPredicted RBP14.13□□□□□ -0.15
TOP2B-203ENST00000424225 AGAP11Q8TF27 550 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 PCDHA3Q9Y5H8 950 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 RPTORQ8N122 1335 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 CCDC194A0A1B0GVG4 234 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 BICDL2A1A5D9 508 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 MGAT5Q09328 741 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 LRIG3Q6UXM1 1119 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 TRIM59Q8IWR1 403 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 NELFCDQ8IXH7 590 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 TMEM47Q9BQJ4 181 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 TRIM31Q9BZY9 425 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 PPP1R9AQ9ULJ8 1098 aa14.13□□□□□ -0.15
TOP2B-203ENST00000424225 PPP1R11O60927 126 aaPredicted RBP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 IPO7O95373 1038 aaKnown RBP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 SERPING1P05155 500 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 MYL1P05976 194 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 USP11P51784 963 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 DHX9Q08211 1270 aaKnown RBP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 PPP2R5AQ15172 486 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 CGB2Q6NT52 195 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 UNC13DQ70J99 1090 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 UBLCP1Q8WVY7 318 aaPredicted RBP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 SH3GLB2Q9NR46 395 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 AIPL1Q9NZN9 384 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 GCOM1H8Y6P7 765 aaPredicted RBP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 LRRN2O75325 713 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 DNAJC8O75937 253 aaPredicted RBP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 MYZAPP0CAP1 466 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 RARAP10276 462 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 CHN1P15882 459 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 KLRC3Q07444 240 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 ARSHQ5FYA8 562 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 GUF1Q8N442 669 aaKnown RBP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 TPCN2Q8NHX9 752 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 SH3RF3Q8TEJ3 882 aaPredicted RBP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 SCFD1Q8WVM8 642 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 CEP72Q9P209 647 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 PNMA3Q9UL41 463 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 MINPP1Q9UNW1 487 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 TSPY2A6NKD2 308 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 KCNA1Q09470 495 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 HLTFQ14527 1009 aaKnown RBP eCLIP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 SLFN11Q7Z7L1 901 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 CLEC10AQ8IUN9 316 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 CCDC24Q8N4L8 307 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 MAGEC3Q8TD91 643 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 ACTRT1Q8TDG2 376 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 PRDM11Q9NQV5 511 aa14.12□□□□□ -0.15
TOP2B-203ENST00000424225 COL14A1Q05707 1796 aaKnown RBP14.12□□□□□ -0.15
TOP2B-203ENST00000424225 CEP104O60308 925 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 MPP2Q14168 576 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 SFMBT2Q5VUG0 894 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 CCDC121Q6ZUS5 278 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 SPATS2Q86XZ4 545 aaKnown RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 RASGEF1CQ8N431 466 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 NSMCE1Q8WV22 266 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 P2RX7Q99572 595 aaKnown RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 VEZTQ9HBM0 779 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 SRRM3A6NNA2 597 aaPredicted RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 DDX3YO15523 660 aaKnown RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 KIF1CO43896 1103 aaKnown RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 STARD3NLO95772 234 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 COASYQ13057 564 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 NT5DC3Q86UY8 548 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 LNX1Q8TBB1 728 aaPredicted RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 XPO6Q96QU8 1125 aaKnown RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 UBA5Q9GZZ9 404 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 NAGPAQ9UK23 515 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 OAS1P00973 400 aaKnown RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 TUBP50607 506 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 ITPK1Q13572 414 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 RAPGEF1Q13905 1077 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 CDCA2Q69YH5 1023 aaPredicted RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 HIBCHQ6NVY1 386 aaPredicted RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 UHMK1Q8TAS1 419 aaKnown RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 RAD54LQ92698 747 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 UTP4Q969X6 686 aaKnown RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 FAM129AQ9BZQ8 928 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 TAS2R14Q9NYV8 317 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 CHORDC1Q9UHD1 332 aaPredicted RBP14.11□□□□□ -0.15
TOP2B-203ENST00000424225 COG5Q9UP83 839 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 WNK3Q9BYP7 1800 aa14.11□□□□□ -0.15
TOP2B-203ENST00000424225 TCRBV7S2A1N4TA0A589 114 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 CCT8L1PA6NM43 557 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 ERVV-1B6SEH8 477 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 DDX3XO00571 662 aaKnown RBP eCLIP14.1□□□□□ -0.151e-7■■■□□ 16
TOP2B-203ENST00000424225 PLSCR1O15162 318 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 TRIM37O94972 964 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 GRIK3Q13003 919 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 ERFEQ4G0M1 354 aa14.1□□□□□ -0.15
TOP2B-203ENST00000424225 TMEM119Q4V9L6 283 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms