RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SPP2Q13103 211 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 GRIK5Q16478 980 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 TIGD5Q53EQ6 642 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 RELL1Q8IUW5 271 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 HERC6Q8IVU3 1022 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 FAM126BQ8IXS8 530 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 PHC3Q8NDX5 983 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 PHOSPHO2Q8TCD6 241 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 ASAP3Q8TDY4 903 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 DHX38Q92620 1227 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 JARID2Q92833 1246 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 ROBO3Q96MS0 1386 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 TMEM74Q96NL1 305 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 MDFIQ99750 246 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 MUC3BQ9H195 1237 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 ZFYVE1Q9HBF4 777 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 NAGPAQ9UK23 515 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 DNAH14Q0VDD8 3507 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 DOCK2Q92608 1830 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 ELP1O95163 1332 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 UMODL1Q5DID0 1318 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 A0A1B0GUL7 405 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 ENC1O14682 589 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 TAF5LO75529 589 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 PDGFBP01127 241 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 GHRHP01286 108 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 PFKMP08237 780 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 EIF2AK2P19525 551 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 HOXA7P31268 230 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 GBP2P32456 591 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 CDK7P50613 346 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 CCL23P55773 120 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 ARID5AQ03989 594 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 TTLL4Q14679 1199 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 PCSK7Q16549 785 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 RPS26P11Q5JNZ5 115 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 PERM1Q5SV97 790 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 MCF2L2Q86YR7 1114 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 ZFPM1Q8IX07 1006 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 GPR161Q8N6U8 529 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 TMEM105Q8N8V8 129 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 CCDC191Q8NCU4 936 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 TNFRSF25Q93038 417 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 GPRASP2Q96D09 838 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 RHOVQ96L33 236 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 GLT1D1Q96MS3 346 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 SPON2Q9BUD6 331 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 GTPBP4Q9BZE4 634 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 SUGCTQ9HAC7 445 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 AVENQ9NQS1 362 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 CWC25Q9NXE8 425 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 CHPF2Q9P2E5 772 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 SLC6A14Q9UN76 642 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 KNSTRNQ9Y448 316 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 DMXL1Q9Y485 3027 aa6.62□□□□□ -1.35
ECHDC1-206ENST00000417628 RFX7Q2KHR2 1363 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 MBTPS2O43462 519 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 PAGE1O75459 146 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 FGRP09769 529 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 ACTN1P12814 892 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 CPB1P15086 417 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 ATF4P18848 351 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 ATP2B1P20020 1258 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 GARTP22102 1010 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 EIF4A3P38919 411 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 LIG3P49916 1009 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 NFIAQ12857 509 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 SMAD4Q13485 552 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 PWP1Q13610 501 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 CLUL1Q15846 466 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 PRAMEF19Q5SWL8 479 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 CEP135Q66GS9 1140 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 LRSAM1Q6UWE0 723 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 PRR23BQ6ZRT6 265 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 DPP9Q86TI2 863 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 FAM35AQ86V20 835 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 CYP2W1Q8TAV3 490 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 RASGRP4Q8TDF6 673 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 TBC1D22AQ8WUA7 517 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 RUBCNQ92622 972 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 PLD4Q96BZ4 506 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 RIPOR3Q96MK2 946 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 HAUS7Q99871 368 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 MRIQ9BWK5 157 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 CEP44Q9C0F1 390 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 CLDND1Q9NY35 253 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 TMOD4Q9NZQ9 345 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 CTNNA3Q9UI47 895 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 TSPYL4Q9UJ04 414 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 ANGPTL2Q9UKU9 493 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 MTUS1Q9ULD2 1270 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 ISY1Q9ULR0 285 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 TLR6Q9Y2C9 796 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 PCDHGC5Q9Y5F6 944 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 ZNF236Q9UL36 1845 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 BRWD1Q9NSI6 2320 aa6.61□□□□□ -1.35
ECHDC1-206ENST00000417628 ADARB2-AS1A8MUL3 147 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 LOC730098B7Z3J9 87 aa6.6□□□□□ -1.35
ECHDC1-206ENST00000417628 ARVCFO00192 962 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms