RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 THAP3Q8WTV1 239 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-205ENST00000411993 SREK1Q8WXA9 508 aaKnown RBP7.08□□□□□ -1.28
HDAC9-205ENST00000411993 BORCS6Q96GS4 357 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 OSBPL2Q9H1P3 480 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 SLC39A2Q9NP94 309 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 JADE2Q9NQC1 790 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 SMPD4Q9NXE4 827 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 SFMBT1Q9UHJ3 866 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 KNG1P01042 644 aa7.07□□□□□ -1.28
HDAC9-205ENST00000411993 AMY2AP04746 511 aa7.07□□□□□ -1.28
HDAC9-205ENST00000411993 AMY2BP19961 511 aa7.07□□□□□ -1.28
HDAC9-205ENST00000411993 JAM2P57087 298 aa7.07□□□□□ -1.28
HDAC9-205ENST00000411993 DBPQ10586 325 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-205ENST00000411993 PKN3Q6P5Z2 889 aa7.07□□□□□ -1.28
HDAC9-205ENST00000411993 ARHGEF18Q6ZSZ5 1173 aa7.07□□□□□ -1.28
HDAC9-205ENST00000411993 CISD2Q8N5K1 135 aaKnown RBP7.07□□□□□ -1.28
HDAC9-205ENST00000411993 RBM15Q96T37 977 aaKnown RBP eCLIP7.07□□□□□ -1.28
HDAC9-205ENST00000411993 TACO1Q9BSH4 297 aaKnown RBP7.07□□□□□ -1.28
HDAC9-205ENST00000411993 KCND1Q9NSA2 647 aa7.07□□□□□ -1.28
HDAC9-205ENST00000411993 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-205ENST00000411993 PRAMEF25A6NGN4 478 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 FAM90A27PA6NNH2 459 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 H0Y858 1186 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 ZNF561-AS1K7EIQ3 104 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 KCNK3O14649 394 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 KLHL18O94889 574 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 RASGRP1O95267 797 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 MAGEA10P43363 369 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-205ENST00000411993 NFKB2Q00653 900 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 C2orf27AQ580R0 203 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 DBX2Q6ZNG2 339 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 RALYLQ86SE5 291 aaKnown RBP7.06□□□□□ -1.28
HDAC9-205ENST00000411993 MAGEB10Q96LZ2 347 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-205ENST00000411993 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 ADAM29Q9UKF5 820 aa7.06□□□□□ -1.28
HDAC9-205ENST00000411993 CCDC163A0A0D9SF12 145 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 NPEPPSL1A6NEC2 478 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 B4GALT4O60513 344 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 Q6ZUG5 572 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 LIMS2Q7Z4I7 341 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 GSTCDQ8NEC7 633 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 CHST13Q8NET6 341 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 SAMD11Q96NU1 681 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 GPR20Q99678 358 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 PTCH2Q9Y6C5 1203 aa7.05□□□□□ -1.28
HDAC9-205ENST00000411993 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-205ENST00000411993 IL18BPO95998 194 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 KRTAP10-2P60368 255 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 PPP2CBP62714 309 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 PPP2CAP67775 309 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 BMS1Q14692 1282 aaKnown RBP7.04□□□□□ -1.28
HDAC9-205ENST00000411993 NFE2L2Q16236 605 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 TRIM61Q5EBN2 209 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 LCE5AQ5TCM9 118 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 DPP8Q6V1X1 898 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-205ENST00000411993 IFNL2Q8IZJ0 200 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 SLC7A14Q8TBB6 771 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 C8orf49Q96NF6 230 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 MRPL4Q9BYD3 311 aaKnown RBP7.04□□□□□ -1.28
HDAC9-205ENST00000411993 SMURF1Q9HCE7 757 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 PPP4R1LQ9P1A2 415 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 COQ6Q9Y2Z9 468 aa7.04□□□□□ -1.28
HDAC9-205ENST00000411993 CLASP2O75122 1294 aaKnown RBP7.03□□□□□ -1.28
HDAC9-205ENST00000411993 LACTBP83111 547 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-205ENST00000411993 GPR155Q7Z3F1 870 aa7.03□□□□□ -1.28
HDAC9-205ENST00000411993 BRAPQ7Z569 592 aa7.03□□□□□ -1.28
HDAC9-205ENST00000411993 CIR1Q86X95 450 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-205ENST00000411993 REXO1L1PQ8IX06 675 aa7.03□□□□□ -1.28
HDAC9-205ENST00000411993 TTC9BQ8N6N2 239 aa7.03□□□□□ -1.28
HDAC9-205ENST00000411993 JMYQ8N9B5 988 aa7.03□□□□□ -1.28
HDAC9-205ENST00000411993 SCDO00767 359 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 C4BPAP04003 597 aaKnown RBP7.02□□□□□ -1.29
HDAC9-205ENST00000411993 PTGS1P23219 599 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 AOAHP28039 575 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 CSF2RBP32927 897 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 EPHB4P54760 987 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 ADAM17P78536 824 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 ZNF568Q3ZCX4 644 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 CPZQ66K79 652 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 MRFAP1L1Q96HT8 127 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 AJUBAQ96IF1 538 aa7.02□□□□□ -1.29
HDAC9-205ENST00000411993 CELF4Q9BZC1 486 aaKnown RBP7.02□□□□□ -1.29
HDAC9-205ENST00000411993 CDK11AQ9UQ88 783 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-205ENST00000411993 ESYT3A0FGR9 886 aa7.01□□□□□ -1.29
HDAC9-205ENST00000411993 USP10Q14694 798 aaKnown RBP7.01□□□□□ -1.29
HDAC9-205ENST00000411993 WDR72Q3MJ13 1102 aa7.01□□□□□ -1.29
HDAC9-205ENST00000411993 SLFN13Q68D06 897 aa7.01□□□□□ -1.29
HDAC9-205ENST00000411993 LILRB2Q8N423 598 aa7.01□□□□□ -1.29
HDAC9-205ENST00000411993 WDR48Q8TAF3 677 aa7.01□□□□□ -1.29
HDAC9-205ENST00000411993 INCENPQ9NQS7 918 aa7.01□□□□□ -1.29
HDAC9-205ENST00000411993 ST6GALNAC2Q9UJ37 374 aa7.01□□□□□ -1.29
HDAC9-205ENST00000411993 INSRRP14616 1297 aa7□□□□□ -1.29
HDAC9-205ENST00000411993 MC4RP32245 332 aa7□□□□□ -1.29
HDAC9-205ENST00000411993 HERVK_113P62684 666 aa7□□□□□ -1.29
HDAC9-205ENST00000411993 SCLYQ96I15 445 aa7□□□□□ -1.29
HDAC9-205ENST00000411993 SSBP3Q9BWW4 388 aaPredicted RBP7□□□□□ -1.29
HDAC9-205ENST00000411993 NCOA5Q9HCD5 579 aaKnown RBP7□□□□□ -1.29
HDAC9-205ENST00000411993 TCRBV16S1A1N1A0A5B0 115 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 SLC12A8A0AV02 714 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 CUTAO60888 179 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms