RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 CASP5P51878 434 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 CCDC43Q96MW1 224 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 GREB1LQ9C091 1923 aaPredicted RBP16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 POTEFA5A3E0 1075 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 CETN3O15182 167 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 EIF3HO15372 352 aaKnown RBP eCLIP16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 BBOX1O75936 387 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 SLC12A3P55017 1021 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 POTEGQ6S5H5 508 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 POTEEQ6S8J3 1075 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 CASKIN2Q8WXE0 1202 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 NAP1L4Q99733 375 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 DHX36Q9H2U1 1008 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 USP40Q9NVE5 1235 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 ADAMTSL1Q8N6G6 1762 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 FRMD3A2A2Y4 597 aa16.64■□□□□ 0.26
LYSMD4-204ENST00000409796 NR2F2P24468 414 aa16.64■□□□□ 0.26
LYSMD4-204ENST00000409796 PAK2Q13177 524 aa16.64■□□□□ 0.26
LYSMD4-204ENST00000409796 QRICH1Q2TAL8 776 aa16.64■□□□□ 0.26
LYSMD4-204ENST00000409796 EDRF1Q3B7T1 1238 aa16.64■□□□□ 0.26
LYSMD4-204ENST00000409796 CERS5Q8N5B7 392 aa16.64■□□□□ 0.26
LYSMD4-204ENST00000409796 MYCBPQ99417 103 aaPredicted RBP16.64■□□□□ 0.26
LYSMD4-204ENST00000409796 ANO3Q9BYT9 981 aa16.64■□□□□ 0.26
LYSMD4-204ENST00000409796 HDAC9Q9UKV0 1011 aa16.64■□□□□ 0.26
LYSMD4-204ENST00000409796 KIF13BQ9NQT8 1826 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 C10orf71Q711Q0 1435 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 KRT14P02533 472 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 SLC9A1P19634 815 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 SKOR1P84550 965 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 TRADDQ15628 312 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 DPY19L2P1Q6NXN4 242 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 SH2D3CQ8N5H7 860 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 BCAS4Q8TDM0 211 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 PPM1EQ8WY54 764 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 MXD3Q9BW11 206 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 MYO3BQ8WXR4 1341 aa16.64■□□□□ 0.25
LYSMD4-204ENST00000409796 GUCY2FP51841 1108 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 CFAP58Q5T655 872 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 IRF2BP2Q7Z5L9 587 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 IQCKQ8N0W5 287 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 LTBP1Q14766 1721 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 RAD21O60216 631 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 SCNN1DP51172 638 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 USP11P51784 963 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 PSMC6P62333 389 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 PTK2Q05397 1052 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 CDC37Q16543 378 aaPredicted RBP16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 KCTD16Q68DU8 428 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 ZNF571Q7Z3V5 609 aaPredicted RBP16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 DNAAF5Q86Y56 855 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 PCDHA1Q9Y5I3 950 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 ZNF233A6NK53 670 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 RAD51CO43502 376 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 GYS1P13807 737 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 USP38Q8NB14 1042 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 PIK3R5Q8WYR1 880 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 LRRC4BQ9NT99 713 aa16.63■□□□□ 0.25
LYSMD4-204ENST00000409796 CYP3A7-CYP3A51PA0A087WV96 503 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 MEIS1O00470 390 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 CYP3A7P24462 503 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 MMP14P50281 582 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 GIT2Q14161 759 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 CATSPER3Q86XQ3 398 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 KLHL7Q8IXQ5 586 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 MBOAT7Q96N66 472 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 GOLPH3Q9H4A6 298 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 SLC26A4O43511 780 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 HOXD13P35453 343 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 PABPC4Q13310 644 aaKnown RBP eCLIP16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 PDCLQ13371 301 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 CDC42EP5Q6NZY7 148 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 SFR1Q86XK3 245 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 MREGQ8N565 214 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 TAF4BQ92750 862 aa16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 P2RX7Q99572 595 aaKnown RBP16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 ARMCX3Q9UH62 379 aaPredicted RBP16.62■□□□□ 0.25
LYSMD4-204ENST00000409796 QSER1Q2KHR3 1735 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 BTNL10A8MVZ5 291 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 KCNK3O14649 394 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 UCHL3P15374 230 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 HOXA10P31260 410 aaPredicted RBP16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 ATP1A2P50993 1020 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 SPIRE1Q08AE8 756 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 RPS6KA1Q15418 735 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 SHROOM1Q2M3G4 852 aaPredicted RBP16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 FRMD5Q7Z6J6 570 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 SLFN12Q8IYM2 578 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 SPAG5Q96R06 1193 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 USP21Q9UK80 565 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 TRAF3IP3Q9Y228 551 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 EBAG9O00559 213 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 AFPP02771 609 aaKnown RBP16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 MYBP10242 640 aa16.61■□□□□ 0.25
LYSMD4-204ENST00000409796 TNNC1P63316 161 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms