RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 DAGLAQ9Y4D2 1042 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 C19orf81C9J6K1 198 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 GTPBP6O43824 516 aaPredicted RBP15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 ENTPD3O75355 529 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 PDIA3P30101 505 aaKnown RBP15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 PRAMEF18Q5VWM3 479 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 TTC19Q6DKK2 380 aaPredicted RBP15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 HHIPL2Q6UWX4 724 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 ARHGAP24Q8N264 748 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 MCUQ8NE86 351 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 IQCDQ96DY2 449 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 LBHD1Q9BQE6 289 aaPredicted RBP15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 VCXQ9H320 206 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 FDX1P10109 184 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 MAP7Q14244 749 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 TTLL4Q14679 1199 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 MESDQ14696 234 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 EXOC3L4Q17RC7 722 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 POTEAQ6S8J7 498 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 SMYD4Q8IYR2 804 aaPredicted RBP15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 HDAC11Q96DB2 347 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 SLC12A6Q9UHW9 1150 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 PCDHA7Q9UN72 937 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 ATF2P15336 505 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 ADCK5Q3MIX3 580 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 CLIC2O15247 247 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 TROVE2P10155 538 aaKnown RBP eCLIP15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 CASP2P42575 452 aa15.45■□□□□ 0.06
PCDHA11-201ENST00000398640 ABCB11O95342 1321 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 MYLK4Q86YV6 388 aaPredicted RBP15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 LMNTD2Q8IXW0 634 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 BBS5Q8N3I7 341 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 CACTINQ8WUQ7 758 aaKnown RBP15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 RNF26Q9BY78 433 aaPredicted RBP15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 MIS12Q9H081 205 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 ACAD9Q9H845 621 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 HYOU1Q9Y4L1 999 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 SGK1O00141 431 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 GDAP1Q8TB36 358 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 MAP4K1Q92918 833 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 ASB14A6NK59 587 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 S100BP04271 92 aaPredicted RBP15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 GTF2A2P52657 109 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 TMTC4Q5T4D3 741 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 ZNF280CQ8ND82 737 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 ZSWIM6Q9HCJ5 1215 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 GOLGA8SH3BPF8 625 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 GCFC2P16383 781 aaKnown RBP15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 PTK2Q05397 1052 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 LLGL1Q15334 1064 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 CNOT6LQ96LI5 555 aaKnown RBP15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 DCP1AQ9NPI6 582 aaPredicted RBP15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 FAM114A2Q9NRY5 505 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 CLGNO14967 610 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 RAPH1Q70E73 1250 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 GRAMD1CQ8IYS0 662 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 GPT2Q8TD30 523 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 DEFB129Q9H1M3 183 aa15.44■□□□□ 0.06
PCDHA11-201ENST00000398640 ATP8B3O60423 1300 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 DENND3A2RUS2 1198 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 STAT3P40763 770 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 MFAP3P55082 362 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 KRT33BQ14525 404 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 IPO11Q9UI26 975 aaKnown RBP15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 CD58P19256 250 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 LONP1P36776 959 aaKnown RBP15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 YWHAGP61981 247 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 JADE1Q6IE81 842 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 DGKHQ86XP1 1220 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 CCNYQ8ND76 341 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 FAM151AQ8WW52 585 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 RAB3IPQ96QF0 476 aaPredicted RBP15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 LSG1Q9H089 658 aaKnown RBP15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 NEURL4Q96JN8 1562 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 RNF40O75150 1001 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 ATP1A2P50993 1020 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 FCGRTP55899 365 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 SLC17A8Q8NDX2 589 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 TBCKQ8TEA7 893 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 CCDC51Q96ER9 411 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 OSBPL5Q9H0X9 879 aaPredicted RBP15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 GBA2Q9HCG7 927 aaPredicted RBP15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 LRRN2O75325 713 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 ELMOD1Q8N336 334 aa15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 PRPF38AQ8NAV1 312 aaKnown RBP15.43■□□□□ 0.06
PCDHA11-201ENST00000398640 APOA5Q6Q788 366 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 NSUN6Q8TEA1 469 aaKnown RBP15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 ACCSQ96QU6 501 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 RMDN3Q96TC7 470 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 METTL14Q9HCE5 456 aaKnown RBP15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 UBR1Q8IWV7 1749 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 SH2B2O14492 632 aaPredicted RBP15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 CMA1P23946 247 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 SNX1Q13596 522 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 NT5C1BQ96P26 610 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 SLC8A2Q9UPR5 921 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 HEXIM1O94992 359 aaKnown RBP15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 BRD1O95696 1058 aa15.42■□□□□ 0.06
PCDHA11-201ENST00000398640 MMP14P50281 582 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms