RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 SGSM1Q2NKQ1 1148 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 TTI2Q6NXR4 508 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 CCDC113Q9H0I3 377 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 GOPCQ9HD26 462 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 ZSWIM5Q9P217 1185 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 ATP8A1Q9Y2Q0 1164 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 LRRC42Q9Y546 428 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 SCN11AQ9UI33 1791 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 SMIM23A6NLE4 172 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 RGS16O15492 202 aaPredicted RBP16.37■□□□□ 0.21
CYLD-202ENST00000398568 ATP6V1C1P21283 382 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 ADAM9Q13443 819 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 LRRC24Q50LG9 513 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 CAMKK2Q96RR4 588 aa16.37■□□□□ 0.21
CYLD-202ENST00000398568 GPR75-ASB3A0A0A6YYF3 556 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 LRRC53A6NM62 1247 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 WFS1O76024 890 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 ECHS1P30084 290 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 TMC3Q7Z5M5 1100 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 SYT15Q9BQS2 421 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 ARHGEF3Q9NR81 526 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 ASB3Q9Y575 518 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 CCDC169A6NNP5 214 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 CYP19A1P11511 503 aaPredicted RBP16.36■□□□□ 0.21
CYLD-202ENST00000398568 FLT3P36888 993 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 R3HDM1Q15032 1099 aaKnown RBP16.36■□□□□ 0.21
CYLD-202ENST00000398568 MAIP1Q8WWC4 291 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 PBKQ96KB5 322 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 NEUROG2Q9H2A3 272 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 MYH13Q9UKX3 1938 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 A0A1B0GVG6 124 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 SNX3O60493 162 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 ATP2C1P98194 919 aaPredicted RBP16.36■□□□□ 0.21
CYLD-202ENST00000398568 BNIP1Q12981 228 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 ENOX2Q16206 610 aaKnown RBP16.36■□□□□ 0.21
CYLD-202ENST00000398568 MEI1Q5TIA1 1274 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 CCDC84Q86UT8 332 aaPredicted RBP16.36■□□□□ 0.21
CYLD-202ENST00000398568 RBM12BQ8IXT5 1001 aaKnown RBP16.36■□□□□ 0.21
CYLD-202ENST00000398568 P2RX5Q93086 422 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 RPS6KC1Q96S38 1066 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 SCOCQ9UIL1 159 aa16.36■□□□□ 0.21
CYLD-202ENST00000398568 KDM3BQ7LBC6 1761 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 CCNE1P24864 410 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
CYLD-202ENST00000398568 MIPOL1Q8TD10 442 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 ZKSCAN3Q9BRR0 538 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 CNNM2Q9H8M5 875 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 FAM114A2Q9NRY5 505 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 SRP68Q9UHB9 627 aaKnown RBP16.35■□□□□ 0.21
CYLD-202ENST00000398568 UTP11Q9Y3A2 253 aaKnown RBP16.35■□□□□ 0.21
CYLD-202ENST00000398568 E7ENQ6 273 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 SLC9C1Q4G0N8 1177 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 NCAPG2Q86XI2 1143 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 ATXN2LQ8WWM7 1075 aaKnown RBP16.35■□□□□ 0.21
CYLD-202ENST00000398568 KIFAP3Q92845 792 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 ZNF594Q96JF6 807 aaPredicted RBP16.35■□□□□ 0.21
CYLD-202ENST00000398568 AP1M1Q9BXS5 423 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 DPH5Q9H2P9 285 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 SP100P23497 879 aaPredicted RBP16.35■□□□□ 0.21
CYLD-202ENST00000398568 RFC5P40937 340 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 TUBP50607 506 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 DBN1Q16643 649 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 EARS2Q5JPH6 523 aaKnown RBP16.35■□□□□ 0.21
CYLD-202ENST00000398568 LONP2Q86WA8 852 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 FANCBQ8NB91 859 aa16.35■□□□□ 0.21
CYLD-202ENST00000398568 BTAF1O14981 1849 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 TPP2P29144 1249 aaPredicted RBP16.34■□□□□ 0.21
CYLD-202ENST00000398568 MCM7P33993 719 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 MUM1Q2TAK8 710 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
CYLD-202ENST00000398568 TMTC2Q8N394 836 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 DUSP9Q99956 384 aaKnown RBP16.34■□□□□ 0.21
CYLD-202ENST00000398568 PPP1R12CQ9BZL4 782 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 DDX47Q9H0S4 455 aaKnown RBP16.34■□□□□ 0.21
CYLD-202ENST00000398568 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
CYLD-202ENST00000398568 SSU72P8A0A1W2PR75 194 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 KRIT1O00522 736 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 SHBGP04278 402 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 CALB2P22676 271 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 MMP13P45452 471 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 NAB2Q15742 525 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.34■□□□□ 0.21
CYLD-202ENST00000398568 NAPBQ9H115 298 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 STMN4Q9H169 189 aaPredicted RBP16.34■□□□□ 0.21
CYLD-202ENST00000398568 RNPEPL1Q9HAU8 725 aa16.34■□□□□ 0.21
CYLD-202ENST00000398568 PLSCR1O15162 318 aa16.33■□□□□ 0.21
CYLD-202ENST00000398568 TCIRG1Q13488 830 aa16.33■□□□□ 0.21
CYLD-202ENST00000398568 RNF220Q5VTB9 566 aa16.33■□□□□ 0.21
CYLD-202ENST00000398568 DENND2CQ68D51 928 aa16.33■□□□□ 0.21
CYLD-202ENST00000398568 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.21
CYLD-202ENST00000398568 CCDC87Q9NVE4 849 aa16.33■□□□□ 0.21
CYLD-202ENST00000398568 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.33■□□□□ 0.21
CYLD-202ENST00000398568 SLC4A4Q9Y6R1 1079 aa16.33■□□□□ 0.21
CYLD-202ENST00000398568 CCDC188H7C350 402 aa16.33■□□□□ 0.2
CYLD-202ENST00000398568 ADORA1P30542 326 aa16.33■□□□□ 0.2
CYLD-202ENST00000398568 GALNTL6Q49A17 601 aa16.33■□□□□ 0.2
CYLD-202ENST00000398568 DNAJC9Q8WXX5 260 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms